Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00790 ATGGCTGCAGGGATTGGCCTTGTCTCGGTGACCCAGATCCAAAATTTGTCAAAATCCCAACACCATAAAAATCAGGCAAGAAACCCTAGCACGGCAAGGTCTCCTTCTTCATTATCTTGGATGTGGAACCAGCAGGATCAAGAAGATGACTCGTGGGAGGTCAGAGCCTTCGCAGAAGACACCAGTAATGTGATGGGCACCACTTGGCCCCCAAGGTCCTACACCTGCACTTTCTGCAGAAGAGAGTTCCGTTCAGCACAGGCCCTCGGCGGTCACATGAACGTTCACCGCCGTGACCGTGCTCGCCTTCACCAAGCTTCACCCAACAACAACAACATCAACCCCATCTCTCCTCTCTCTATCTCACCGCACCCTTCACCTTCTTCTTTTCTCAACATCTCTCCCTCCCCGGACCCTTTTGCAAATGGGGGATTGTGCCTCCTTTACCCCTTCCCTAGCCCTAACACTGCTCCTTTCTCCCCTCTTGCCCACAATACTTGTTTGAATAATGCATGTGCTGACTCACCCTCCACCTTTCATCCCGTTTCTTCCTCCCATTCCCACCCTTCAAACACCTTGATGATGGTCCCAACTTGCTCCCCTACTTCATTTGATTTCTCTGTTGCTCAGCCTCATCCAGGGATAAATCTCTTCTCTTCTTCTCTTGGGAAAGTGGAACAACAACCCACTGCTTCTTCCCCTCACCATGAGGAGCTTGATCTGGAGCTCCGCTTGGGAAATAGACCAACATCAACCTCATGA 762 0.5092 MAAGIGLVSVTQIQNLSKSQHHKNQARNPSTARSPSSLSWMWNQQDQEDDSWEVRAFAEDTSNVMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQASPNNNNINPISPLSISPHPSPSSFLNISPSPDPFANGGLCLLYPFPSPNTAPFSPLAHNTCLNNACADSPSTFHPVSSSHSHPSNTLMMVPTCSPTSFDFSVAQPHPGINLFSSSLGKVEQQPTASSPHHEELDLELRLGNRPTSTS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00790 253 Gene3D Classic Zinc Finger 62 115 - -
Pste7g00790 253 Pfam C2H2-type zinc finger 74 98 - -
Pste7g00790 253 MobiDBLite consensus disorder prediction 16 38 - -
Pste7g00790 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Pste7g00790 253 PANTHER OS07G0101800 PROTEIN 46 249 - -
Pste7g00790 253 SUPERFAMILY beta-beta-alpha zinc fingers 71 101 IPR036236 -
Pste7g00790 253 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Pste7g00790 253 MobiDBLite consensus disorder prediction 223 253 - -
Pste7g00790 253 SMART c2h2final6 74 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00790 Pste-Chr7 7209734 7210495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00790 39 107 C2H2 Transcription Factor Family AT4G17810 68.831 1.51e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste7g00790 zf-C2H2_6 5.4e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00790 7 7209734 7210495 Pste7g00790 7 7209734 7210495 ECH
Pste1g01652 1 5069802 5070515 Pste7g00790 7 7209734 7210495 PCT