Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00789 GCATTCTGTTTCTTCACCCAGAAAAATAAAGCGATTTTTGTTTCCTTTTTAATTTTTTCAAACTGAGAGACTTAGCTGCTAGAGTTTTTGTGTTCTCTGATTCTCTCTTATCATCTGAGCTCGTTGTGGTTGAGGACTCTGCAGTTGGCGCACTTCACAATCACTCTGATTGGGTGATCTGTGTGCAATTTGGGGCTGAAATCTTGCTCGTGTTTCCATGCCTTTGTGAATTGCCGACGGAATGAAGAGGTCAAGGGATGATGTTTACATGAGTTCACAACTCAAACGGCCAATGGTGTCTTCTAGAGGAGAACCCTCGGGGCAACCGCAGATGATGAGTGGTGGTGGTCAGAAACTAACCACAAATGATGCCTTGGCATATCTCAAGGCAGTAAAGGACATGTTTCAAGATAAGAGGGAAAAGTATGATGACTTTCTGGAAGTCATGAAGGATTTCAAGGCTCAAAGAATTGATACAGCAGGTGTTATAGCAAGAGTTAAGGAACTCTTTAAAGGCCACAAAGATCTAATTTTGGGATTTAACACCTTCTTGCCAAAGGGATATGAAATTACACTTCCATTGGAAGATGAACAACCTCCCCAAAAGAAGCCCGTTGAATTTGCAGAAGCCATAAGTTTTGTGGGCAAGATTAAGGCTCGTTTTCTAGGCAATGACCGTGTTTATAAGTCATTTCTAGACATACTAAATATGTACAGAAGGGAAACCAAATCCATCACTGAGGTTTATGAGGAGGATCATGCAGATCTTCTAGAGGAGTTTACTCATTTTCTTCCTGATACTTCAGGAACAGCCTCTAATCACTATGCTTCTGCTCGAAATTCTCTCCTTCGTGATAGGATCTCTGCAATGCCAGCAGTGAGACAAATGCATGCTGAAAAGAGAGAAAGGAACATAGCTTCACATGGTGATCGAGACCTCAGTGCTGACCATCCTGATCCAGAATTTGACAGATGTTTGATTAGAGCTGATAAGGATCAGAGGAGGCGTAATGAGAAGGAAAAGGACAATAGAGAAGAGAGAGACAGGAGACAACGGGAAAGGGATGATAGAGATTATGATCATGATGGTAGTAGGGAGAATTTATCTCACAAGCGGAAATCTGGTTTTAGGGCTGAAGACTCTGGTGCTGATCCATTGCATGAGACAGATGAAAATTTTGGCATGCACCCTATCTCCTATGCTTGTGAGGATAAAAGTTCTTTAAAAAGTATGTGTAGTCCGGTGATTGGTTACCTTGACAAAGTGAAGGAGAAGCTACGAAATCCTGAGGATTACCAGGAATTTTTGAAGTGCCTAAACATCTACTGCAAGGAAATAATTGCCAAACATGAATTGCAATCATTGGTAGGGAATTTACTAGGAAAATATGCAGATCTTATGGAGGGATTTGATGAATTTTTGACTCAATGTGAGAAGAACGAAGGACTCCTTCCTGGTCTCCTGAAAAAAAGACACGGACCAAAACCAATGAAGGTAGAGGACAGGGATCGAGATCGTGATAGGGATGATGGGATGAAAGAAAGGGATCGTGAATACCGAGAAAGGGACAGATTCAATGCAGCTGCTAACAAGGATGTTTCAGTTCCTAAGATGTCTCTGTACACTAGCAAGGATAAGTATGCATCAAAACCTATAAGTGAGCTGGATCTTTCTAACTGCGAACAATGCACTCCCAGTTACCGTCTTCTGCCAAAAAATTACCCAATACTGCCAGCTAGCCAGAGAACAGAACTTGGTGCAGAGGTGTTAAATGATCACTGGGTTTCTGTTACTTCTGGCAGTGAGGACTATTCCTTTAAACACATGCGCAAAAATCAGTATGAGGAGAGCTTGTTTAGATGTGAAGATGACAGGTTTGAACTTGATATGTTGTTAGAGTCTGTAAACGTGGCAACTAAGCGTGTTGAAGAGCTCTTAGAAAAGATTAATGCTAATATAATTAGAGACAGTCCAATTCGTATTGAGGACCACTTAACAGCTCTAAATCTTAGGTGCATTGAACGATTATATGGGGATCATGGGCTGGATGTAATGGATGTGCTAAAGAAGAATGCATCTTTAGCTTTGCCAGTCATATTAACCCGCTTGAAGCAGAAACAGGAAGAGTGGGCAAGGTGTCGTGCTGATTTCAATAAAGTTTGGGCTGAAATCTATGCAAAGAACTATCACAAATCACTTGACCATCGTAGTTTCTACTTTAAGCAGCAGGATACAAAAAGCTTGAGCACTAAAGTCTTACTGGCAGAAATCAAAGAAATTAGTGAGAAGAAACAAAAGGAAGATGATGTTCTTCTTGCAATTGCAGCTGGAAACAGACAGCCTATTATTCCTCATATGGAATTTGTGTATCCTGATCCGGACATTCATGAAGATCTGTATCAACTCATAAAATATTCCTGTGGAGAGATGTGTACAACTGAACAGTTGGATAAAGCTATGAAGATTTGGACAACATTTTTAGAACCCATGCTTGGAGTTCCTTCTCGACCCCAAGGTCTGGAGGATACAGAAGATGTAGTCAAGAATAATTCTACCAAAAGTGGCAATGCAATTGTTGATGGTGATGTTAGTCCTGTAATGAATCCTAAGACTTTAAACAAAAATAGAAATGGGGATGAGAGTTTTCCATTAGATCAATCACATTCCTGCAAACAATGGCAAACTAGTGGAGATAATAAGGTTAAAGAGGATAATTATCTTGATTCAGACCGCTCTGCACATAAGACTGAAACCTTGGGAAGTAGTACACAGCAGGGTAAAATGCATATAAATGCCTCTATGCCTGATGAAGTATCAAGAGTCTATAAGCAAGATCATTCCATTGAACGGTTGGTGAATGCTAATATGTCCTCCGGTATTGAGCAAAGTAATAGAAGAACAAATGTGGATAATGCATCAGGACTTACTGCTACTCCATCAAGAACCAGTAATATTTCCGGTGAGGGAGGACTTGGTTTACCTTCATTAGAGGGTGCTGATTCTACAAGACCAGTTACATCCACAAATGGGGCCGTAGTTGAGGATACTAAAGTTCAGAGATATTGTGAAGAATCAGTTGAACACTTAAAAAGTGAAAGAGAAGAGGGTGAATTATCACCTAATGGTGACTTTGAAGAGGATAACTTCGCAGTTTATGGACATACTAGTTTGGAGGCAGCCCATAAAGGAAAAGATGGTACCATTTGTCGACAATACCAAAATAGACATGGGGAAGAAGTTCGTGGTGAAGCAAGAGGAGAAAATGATGCTGATGATGAAGGAGAAGAAAGTCCCCATAGATCACTAGAGGACAGTGAAAATGCTTCTGAAAATGGTGATGTTTCTGGTACTGAGTCTGCTGATGGCGATGATTGTTCTCGAGAACATGAGGATGGGGATCATGAACATGATAACAAGGCTGAGAGTGAAGGTGAAGCCGAAGGAATGGCTGATGCCAATGATGTTGATGGAGATGGTGCCTCTTTGCCATATTCAGAACGCTTTCTTATCACTGTAAAGCCTCTGGCAAAACATGTTCCTCCAGTGTTGCATGAGAAAGAAAAAACTGTTCGAGTCTTTTATGGAAATGATTCCTTTTATGTGCTATTTAGACTTCATCAGACATTGTACGAGAGGATCAAATCTGCTAAGGTTAACTCATCATCTGCTGAAAGGAAGTGGAGGGGTTCAAATGATACAAGCTCTACTGATCAATATGGAAGGTTTATGAATGCCCTCTACAATTTACTTGATGGGTCTTTTGATAGTGCAAAATTTGAGGATGACTGTCGAGCTATCATTGGAACTCAGTCATATGTCTTATTCACATTAGACAAGCTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCTGCCGAGGAGATGGATAACAAGCTTCTTCAACTATATGCATATGAAAAATCAAGAAATCCTGGAAGATTTATTGATTTAGTTTATAATGAAAATGCTCGTGTTCTACTTCATGATGAGAATATATATCGTATTGAATGTTCACCTGCACCTACTCAAATGTCTATTCAACTGATGGACTATGGATATGATAAGCCTGAAGTGACTGCTGTGTCAATGGACCCTAATTTTTCAGCCTATCTCCACAATGACTTCCTATCTGTTGTCCCTGACAAAAAGAAGTCAGGAGTTTACCTGAAGAGGAATAAACGTAAGTATGCCAGTAGTGATGAATTTTCAAGCCAGACCGTGGATGGACTACAAATTATCAATGGTCTAGAATGTAAGATAGCTTGCAGTTCATCCAAGATACTGAGGACTTTTTATATCGAAGAAGAAAAAAGACAACCTTGCGTGAAAGCAATTCATGCCATGAACAGGCAAAGTCCTCGATTTGTTCAAGCAGAGTACAACGATTCTGCAAATTATTTTCAATTTGACGATGACATTCATTTTGAGCCTGAGAAGCAACCAAATAAGGCAATACAGAAGGGAGATGAGGCACAGAGATTGTAG 4489 0.4014 MKRSRDDVYMSSQLKRPMVSSRGEPSGQPQMMSGGGQKLTTNDALAYLKAVKDMFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHKDLILGFNTFLPKGYEITLPLEDEQPPQKKPVEFAEAISFVGKIKARFLGNDRVYKSFLDILNMYRRETKSITEVYEEDHADLLEEFTHFLPDTSGTASNHYASARNSLLRDRISAMPAVRQMHAEKRERNIASHGDRDLSADHPDPEFDRCLIRADKDQRRRNEKEKDNREERDRRQRERDDRDYDHDGSRENLSHKRKSGFRAEDSGADPLHETDENFGMHPISYACEDKSSLKSMCSPVIGYLDKVKEKLRNPEDYQEFLKCLNIYCKEIIAKHELQSLVGNLLGKYADLMEGFDEFLTQCEKNEGLLPGLLKKRHGPKPMKVEDRDRDRDRDDGMKERDREYRERDRFNAAANKDVSVPKMSLYTSKDKYASKPISELDLSNCEQCTPSYRLLPKNYPILPASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVATKRVEELLEKINANIIRDSPIRIEDHLTALNLRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKVLLAEIKEISEKKQKEDDVLLAIAAGNRQPIIPHMEFVYPDPDIHEDLYQLIKYSCGEMCTTEQLDKAMKIWTTFLEPMLGVPSRPQGLEDTEDVVKNNSTKSGNAIVDGDVSPVMNPKTLNKNRNGDESFPLDQSHSCKQWQTSGDNKVKEDNYLDSDRSAHKTETLGSSTQQGKMHINASMPDEVSRVYKQDHSIERLVNANMSSGIEQSNRRTNVDNASGLTATPSRTSNISGEGGLGLPSLEGADSTRPVTSTNGAVVEDTKVQRYCEESVEHLKSEREEGELSPNGDFEEDNFAVYGHTSLEAAHKGKDGTICRQYQNRHGEEVRGEARGENDADDEGEESPHRSLEDSENASENGDVSGTESADGDDCSREHEDGDHEHDNKAESEGEAEGMADANDVDGDGASLPYSERFLITVKPLAKHVPPVLHEKEKTVRVFYGNDSFYVLFRLHQTLYERIKSAKVNSSSAERKWRGSNDTSSTDQYGRFMNALYNLLDGSFDSAKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQAVAAEEMDNKLLQLYAYEKSRNPGRFIDLVYNENARVLLHDENIYRIECSPAPTQMSIQLMDYGYDKPEVTAVSMDPNFSAYLHNDFLSVVPDKKKSGVYLKRNKRKYASSDEFSSQTVDGLQIINGLECKIACSSSKILRTFYIEEEKRQPCVKAIHAMNRQSPRFVQAEYNDSANYFQFDDDIHFEPEKQPNKAIQKGDEAQRL 1415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00789 1415 MobiDBLite consensus disorder prediction 767 846 - -
Pste7g00789 1415 SUPERFAMILY PAH2 domain 37 106 IPR036600 GO:0006355
Pste7g00789 1415 Coils Coil 548 568 - -
Pste7g00789 1415 Coils Coil 249 276 - -
Pste7g00789 1415 Gene3D Paired amphipathic helix 327 399 IPR036600 GO:0006355
Pste7g00789 1415 MobiDBLite consensus disorder prediction 993 1078 - -
Pste7g00789 1415 Pfam Sin3 family co-repressor 481 572 IPR013194 -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 221 311 - -
Pste7g00789 1415 ProSiteProfiles PAH domain profile. 123 187 IPR003822 GO:0006355
Pste7g00789 1415 MobiDBLite consensus disorder prediction 1040 1066 - -
Pste7g00789 1415 Pfam Paired amphipathic helix repeat 350 394 IPR003822 GO:0006355
Pste7g00789 1415 Pfam Paired amphipathic helix repeat 60 104 IPR003822 GO:0006355
Pste7g00789 1415 Pfam Paired amphipathic helix repeat 147 184 IPR003822 GO:0006355
Pste7g00789 1415 MobiDBLite consensus disorder prediction 993 1027 - -
Pste7g00789 1415 SUPERFAMILY PAH2 domain 333 397 IPR036600 GO:0006355
Pste7g00789 1415 FunFam Paired amphipathic helix protein Sin3 43 105 - -
Pste7g00789 1415 SMART hdac_interact2seq4b 479 579 IPR013194 -
Pste7g00789 1415 SUPERFAMILY PAH2 domain 119 186 IPR036600 GO:0006355
Pste7g00789 1415 MobiDBLite consensus disorder prediction 405 442 - -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 14 36 - -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 946 967 - -
Pste7g00789 1415 Pfam C-terminal domain of Sin3a protein 1113 1348 IPR031693 -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 788 816 - -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 817 835 - -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 876 909 - -
Pste7g00789 1415 FunFam Paired amphipathic helix protein SIN3 326 399 - -
Pste7g00789 1415 Gene3D Paired amphipathic helix 43 105 IPR036600 GO:0006355
Pste7g00789 1415 FunFam Paired amphipathic helix SIN3-like protein 122 187 - -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 876 927 - -
Pste7g00789 1415 MobiDBLite consensus disorder prediction 1 36 - -
Pste7g00789 1415 ProSiteProfiles PAH domain profile. 37 107 IPR003822 GO:0006355
Pste7g00789 1415 PANTHER SIN3B-RELATED 37 1257 IPR039774 GO:0003714
Pste7g00789 1415 Gene3D Paired amphipathic helix 121 188 IPR036600 GO:0006355
Pste7g00789 1415 ProSiteProfiles PAH domain profile. 328 397 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00789 Pste-Chr7 7200038 7212900 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00789 28 119 WRKY Transcription Factor Family AT4G12020 60.638 7.09e-25 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste7g00789 Sin3a_C 7.8e-54 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00789 7 7200038 7212900 Pste7g00789 7 7200038 7212900 ECH
Pste1g00374 1 1308036 1319193 Pste7g00789 7 7200038 7212900 PCT