Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00785 GGCCAACAAGAGTTAACCGCTTCCACTGTTTTGAAACTGTCAGCAAACAAAACCAAGTAGCTTAAGACAAAGAAGGACAGAAAATCTTGCAGATAATAGTTACCAATGAACAGAAAAAGCAGAAGAGCATATTTGTTTTCAGAATCCTTGTTTCTTCTACTTGCCTCATGGCTTTGAATATGATGCTTCAATCATGGCCTTTTATGAGCCTTGTTTTTGTTTTGCTTTTGCATAGTTTGTCAATACCATGTTGTCATTGTCAAACCAGCAATTCTCCTCCTCAGAACATTGAAACTTTCTATCCCAATGGAACATCAGCCACAGCCCCATCAGCACAACAACCAGGTACAACCCCGCAGCCACCACAACAACCACCATCAACAAGTGGTACTATAGCACCTAGCCGCGGATCGTCGAATGGTAAGATAGGGACAGCAGTGGCTGCAACTGCAGCTAGCACCATAGTTGTTTGTGGTTTAGTATTCTTTTTGGTTCAAAGGTGCTTAAGGGCCAGGAAGAGAAAGAGAGAGGATATAAGCAACAGTGCTGGTGGTGGAGATACCCGTGTGGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGAAATGTGAAAGGGTTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGGAAGAACTCTAACAAGGATCTGCATAAGGAGGTCTTGAGTAGTCCTAGAAACAAAGAAAAAAAAGATGAAGAAAATGGTCATGATGGAAATCAAGTGAAAAAATCCAAGTCTATCCAAGAAGTTCCTCTACTTAGAGGGAAATCTTCAACTTCTCACTTAAATATATCTCCAGAAGAGGATGAACCATATAGATTTTCACCACTTCCTTCTCCTTCTCCAGCTAAAGTTTCTGCTCCTACTCCTACTCCTTCTAGTCTTCCTGCATCAACTGGAGTTGTTATCAAGGATGTTCAGAAACCGGACTCTCCAACTCAACCATCAACTCCACCCCCTCCTGTTACACCTTCAACACCACCAACTTCTACTTTTGCAGCAGTTCCAAAAACAAATAATCCGGGACCGCTGCCTCCTCCTCCCCCAATTCCAGCTAGAAGAAGTCCAGCACCACCTCCTCCTCCTCCAGCTTCATCAAAATCACCACCTACTCCCATTGAAATGCCAGCTATTAAACAAAAGAACTCTTCTGGAAAAGGCATGTCAGAAACCAGCAATGATCAAATGAAGCTAAAGCCTTTGCATTGGGATAAGGTGAACACTCATAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGCTCTTTCAGGGTTGATCAAGATCTTATGGAGGCTCTCTTTGGTTATGTGGCGACTAACCGAAGATCACCCAAAGGAAGGAGTCACACAGCCATTCCAAGCAAGGATGCCTCTGCAACTACAGCAAAAATTTTCCTTCTTGACCCCAGAAAATCACAGAACATTGCTATTGTTCTGAAATCTCTTGCAGTCTCACATAGTCAAATTATTGATTCACTTACTGATGGTAAGGGCCTCAATGCAGATACTCTAGAAAAGCTTTCTAGAGTTTCCCCAACTGAAGAAGAGCAATTTCTTATCCTTGAATACAAGGGAGATCCAACAAGACTGGCAGCAGCTGAATCTTTCCTTTACAGCATCCTTAAATCTGTTCCTTCAGCTTTCATGCGCTTGAATGCCATGATATTCAGATTGAACTATGACTCAGAGATTCAAGAAATCAAGGAATCACTGCAGACAATTGAACTGGGGTGTAAGGAGCTTAAAAGCAAAGGGCTCTTTGTGAAGCTACTTGAAGCAGTGCTTAAGGCAGGAAACCGAATGAATGCAGGAACTGCAAGAGGTAATGCTCAAGCTTTCAATTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAGTACCAATGGAAGAACCACACTGCTTCACTTTGTGGTGGAAGAGGTAGTCCGGTTAGAGGGAAAACGGGTTGCTCTTAACCGCAATAGCAGCTTGAGCAGTAGCAGCAGTAGGAGCAGCACCAACAGCAATGGACACTATGATAACTATGCTGCTTCGAATGAACTGATAGAAAAGGAATATATAACACTAGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTATCTAATGTCAAAAAAGCAGCACAAATAGATTTCAACAATTTAGTTGGTTCAATCTCAGCCCTCTCAACCCGGTTAACCGAAGTTCAAGAACTTGTTTCCTTGTGTGGAAATAGAGAAGGAGGATATTTTGTGAAAGAAATGGATCGTTTTCTTGGAAATGCTAAGGAAGAGTTGAAATTAGTGAGGGAGAAGCAAACAAGTGTGTTGCAGTTGATCAAGAAAACAACACAATATTATCAAGCAGGAACTTCAAAAGAGACTTCAGAAGACTGTCTTCAATTGTTTGTCATTGTGAAGGATTTTCTGGGAATGGTTGATCAAACTTGCATTGAGATTGCACGTGACATGCAGAAGAGAAAGCCTCCCAAGGCAATTTTTGCGTGATTATCACAGTGGCTGGCCCCAACACAAATTAGTTCTGTGATTTTCAAACTGGTGGAACATATCATATCATCTAACTCAAAATGATTCAACTTATGCTATTGGATGACGGGGCTAAAGTCCCCAAAATCAGATTTCTGAAGATTGGAGTTCTGATGTTTCATCAAAGTCTTAAGAGATTACAAATGGACTTCAACTCAAAAGTATAGCGTTCCTCACCATTGGAATTGGATTTTAAGAAATATTGTGAAAGCAGGCCAAAGCTTTTACAATTCAAAAGCTGAAACCATTTTTATGGCTTTAACATTTTTTCAGTATTAAACGTCCAAGTGTACGTGTCAAATAGTTCTTAGCAAATTTTAATTCTGGTGTATATCATTGTTGAATTCCTTCAGCATCAACTATAACTTGGTCGTATTCTTTTACCTTTTTTTGTTGTATATACTCTTATAATTTGTAATTTTGGATAAAGGAGATTTTATTTTTAAATTTTTC 3029 0.4051 MALNMMLQSWPFMSLVFVLLLHSLSIPCCHCQTSNSPPQNIETFYPNGTSATAPSAQQPGTTPQPPQQPPSTSGTIAPSRGSSNGKIGTAVAATAASTIVVCGLVFFLVQRCLRARKRKREDISNSAGGGDTRVVPQGNVFERIDGNVKGLIVDEDGLDVVYWRKLEGKNSNKDLHKEVLSSPRNKEKKDEENGHDGNQVKKSKSIQEVPLLRGKSSTSHLNISPEEDEPYRFSPLPSPSPAKVSAPTPTPSSLPASTGVVIKDVQKPDSPTQPSTPPPPVTPSTPPTSTFAAVPKTNNPGPLPPPPPIPARRSPAPPPPPPASSKSPPTPIEMPAIKQKNSSGKGMSETSNDQMKLKPLHWDKVNTHNADHSMVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGRSHTAIPSKDASATTAKIFLLDPRKSQNIAIVLKSLAVSHSQIIDSLTDGKGLNADTLEKLSRVSPTEEEQFLILEYKGDPTRLAAAESFLYSILKSVPSAFMRLNAMIFRLNYDSEIQEIKESLQTIELGCKELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTNGRTTLLHFVVEEVVRLEGKRVALNRNSSLSSSSSRSSTNSNGHYDNYAASNELIEKEYITLGLPIVGGISSELSNVKKAAQIDFNNLVGSISALSTRLTEVQELVSLCGNREGGYFVKEMDRFLGNAKEELKLVREKQTSVLQLIKKTTQYYQAGTSKETSEDCLQLFVIVKDFLGMVDQTCIEIARDMQKRKPPKAIFA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00785 789 MobiDBLite consensus disorder prediction 40 58 - -
Pste7g00785 789 Gene3D Formin, FH2 domain 346 779 IPR042201 -
Pste7g00785 789 MobiDBLite consensus disorder prediction 40 83 - -
Pste7g00785 789 Pfam Formin Homology 2 Domain 349 767 IPR015425 -
Pste7g00785 789 MobiDBLite consensus disorder prediction 210 224 - -
Pste7g00785 789 PRINTS Proline rich extensin signature 310 331 - -
Pste7g00785 789 PRINTS Proline rich extensin signature 293 305 - -
Pste7g00785 789 PRINTS Proline rich extensin signature 245 257 - -
Pste7g00785 789 PRINTS Proline rich extensin signature 263 279 - -
Pste7g00785 789 SMART it6_source 344 782 IPR015425 -
Pste7g00785 789 MobiDBLite consensus disorder prediction 271 286 - -
Pste7g00785 789 Coils Coil 525 545 - -
Pste7g00785 789 PANTHER FORMIN-RELATED 15 778 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste7g00785 789 MobiDBLite consensus disorder prediction 232 248 - -
Pste7g00785 789 MobiDBLite consensus disorder prediction 174 202 - -
Pste7g00785 789 SUPERFAMILY Formin homology 2 domain (FH2 domain) 360 781 - -
Pste7g00785 789 MobiDBLite consensus disorder prediction 298 329 - -
Pste7g00785 789 ProSiteProfiles Formin homology-2 (FH2) domain profile. 347 789 IPR015425 -
Pste7g00785 789 MobiDBLite consensus disorder prediction 174 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00785 Pste-Chr7 7150084 7153213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00785 354 775 FH2 protein (formin) Gene Family AT1G59910 53.882 2.18e-144 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00785 7 7150084 7153213 Pste7g00785 7 7150084 7153213 ECH
Pste1g00348 1 1238449 1240899 Pste7g00785 7 7150084 7153213 PCT