Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00783 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGCTTTGTTCAAAACCTTCACAGACCGGACTTGCACTTGCAACAGCAGCAGCAGCACCGCGATTCGGAGGAGCAAGAAACGACGCCGCCAAACCGCGGAACGGCACCGTTCGAAGACGATGACCGAAGCCAAGGCCTGGAACTAGTTTCCGCGGGTCCCGGGGATGTGGTGGGTCGCCGTCCACGTGGCAGGCCCCCGGGCTCCAAGAACAAGCCCAAGCCACCGGTCATAATCACTCGCGAGAGCGCCAACACGCTCAGGGCCCACATCCTCGAAGTCGGAAGCGGCTCCGATGTCTTCGACTGCGTCACCACCTACGCGCGTCGCCGCCAGCGCGGGATCTGCGTCCTCAGCGGCAGCGGCACCGTCACCAATGTCAGTCTCCGCCAGCCCGCGGCCGCCGGCGCCATCCTCACGCTGCACGGTAGGTTCGAGATTCTCTCCCTCTCCGGCTCCTTCCTCCCGCCGCCGGCTCCCCCGGGGGCCACCAGCCTCACCATATACCTCGCCGGCGGGCAGGGGCAGGTTGTGGGAGGAAACGTTGTCGGAGAGCTAACGGCGGCAGGGCCCGTAATCGTAATTGCGGCGTCGTTCACCAACGTGGCTTACGAGAGGTTACCGTTAGAAGAAGAGGAACAGCTTCAGATTCAACCACCTGCTACTACGTCGTCTCATGCCGTTAACAACAACAATAACAACACCAACCCTTTTCCTGACCCTTCTTCGGGACTTCCCTTCTTCAATTTACCTCTCAATATGCAGAATGTTCAGTTACCAGTGGAGGGTTGGGCAGGAAACGCTGCTTCACGTCCACCACCTTTTTGA 855 0.6 MAGLDLGSASRFVQNLHRPDLHLQQQQQHRDSEEQETTPPNRGTAPFEDDDRSQGLELVSAGPGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGSDVFDCVTTYARRRQRGICVLSGSGTVTNVSLRQPAAAGAILTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQLQIQPPATTSSHAVNNNNNNTNPFPDPSSGLPFFNLPLNMQNVQLPVEGWAGNAASRPPPF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00783 284 Gene3D - 96 233 - -
Pste7g00783 284 MobiDBLite consensus disorder prediction 16 86 - -
Pste7g00783 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 228 - -
Pste7g00783 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 235 IPR014476 GO:0003680
Pste7g00783 284 MobiDBLite consensus disorder prediction 23 37 - -
Pste7g00783 284 CDD DUF296 97 180 IPR005175 -
Pste7g00783 284 MobiDBLite consensus disorder prediction 226 251 - -
Pste7g00783 284 PIRSF ESCAROLA 7 283 IPR014476 GO:0003680
Pste7g00783 284 ProSiteProfiles PPC domain profile profile. 93 229 IPR005175 -
Pste7g00783 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 210 IPR005175 -
Pste7g00783 284 FunFam AT-hook motif nuclear-localized protein 96 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00783 Pste-Chr7 7124271 7125125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00783 1 282 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.993 1.74e-103 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01628 1 5010248 5013394 Pste7g00783 7 7124271 7125125 PCT