Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00779 ATGGACGCTCGAGAGCCGCCCCGCCCGTCGCCCACCATGATGGCGGGCCCCACCACCTACGCCTCCCCCAACATCGGCCCTAATTCCTCCCTCATGGCCCCCGCCACCGCGCGATTCCTTTGGCTCTGTGCTCCTCAGCCTCCGCCCTCGTCGGAGCCCTTCCCCTCCGCCGCCTACGACGGCCCCTCCTCGCCGATGAAGGCCTGCTCCCTCGCCAAGAAGAAGCGCGGCCGTCCCAGGAAGTACTCCCCGGACGGTAACATTGCCCTCGGCCTCGCTCCCACCCATGGCTCTCCTCCTCCGCCTGCCCCGCCACAGCCTCCGGCGGCGGCGGCACCGATTCGGCCGGCGCGGCGTCCGGCGATGCTCCGGCGAAGAAGCACCGCGGCAGGCCTCCGGGGTCTGGGAAGAAACAGCTGGATGCCCTCGGTAGTTATTGTTGTTTTTGAGTTTGGTTTGTGTTTGAATGGAACTGATTGTTATGGTTTGTTTGTTGTTTTTGTTTGGGTTTTATGTGAAGGAGCTGGTGGGGTTGGATTCACGCCCCACGTGATCATGGTCGAGTCTGGCGAGGACATCACTGCAAAACTTATGGCTTTTTCTCAGCAAGGGCCTCGGTCAGTTTGTATTCTTTCTGCTATTGGTGCAGTCTGTAATGTCACCCTACGACAGCCTGCATTGTCTGGTGGTACTGCTACATATGAGGGCCGATTTGAGATTATATCTTTATCAGGTGCTTTGCAGCAATCTGAAAATAACAGTGACCGTTCCAGAACATGCACTTTGAATGTATCCCTCGCAGGGTCTGATGGACGTGTGTTGGGTGGTGGAGTTGCTGGAACACTAATTGCAGCATCAACTGTACAGGTCATTGTGGGTAGCTTTGTCGTGGATGGCAAAAAGTCGAGCTCCAATGCCCTCAAATCTGGGCCTTCTTCTGCAGCACCACCTCAAATGCTTACCTTTGGTGCTCCCGTGACTCCTACTAGTCCTACCTCTCAAGGGCCTTCAACCGAGTCCTCTGATGAACAAGATCACAGTCCTTTTTGTAGGGGCCCTGGGCCTGGGCCTGGACTCTACAATAATGCTACTCAGCCCGTTCACAATATGCCTATGTACCATCATCAACTATGGGCTGGTCAAAATCATCAGTGAAGAAAATGTGATTTGGGATTTACAGTACTGAACCTGCCTGTTCAAAGTAGTGGCTAGAGCCTAGAGGTCATTTCCGAAATGCTAACTGCATTTTTGAGACTGACTTTAGAACAGTCTACCTTAAGATTTAAGTTATTCAGTAAATTAGGATTTTTTTTTTCTTTTAATTATAATCGTAACATTTCTAGCGATCATAGTCAAGGATATGTTGCCCATTATCCGAATTCTGTCATTTTGGAGTTTGCTGTCTGCACTCCGCATTTTAGAATAGCAGAATCAGAATGTGCGTTCCTCCATACATCGTGCTTCATTGTTTATTGTTTATCCATACATCGTGCTTCATTGTTTATTGTTTATTTAGTTGAGTTTGCTACATATTT 1535 0.5068 MDAREPPRPSPTMMAGPTTYASPNIGPNSSLMAPATARFLWLCAPQPPPSSEPFPSAAYDGPSSPMKACSLAKKKRGRPRKYSPDGNIALGLAPTHGSPPPPAPPQPPAAAAPIRPARRPAMLRRRSTAAGLRGLGRNSWMPSVVIVVFEFGLCLNGTDCYGLFVVFVWVLCEGAGGVGFTPHVIMVESGEDITAKLMAFSQQGPRSVCILSAIGAVCNVTLRQPALSGGTATYEGRFEIISLSGALQQSENNSDRSRTCTLNVSLAGSDGRVLGGGVAGTLIAASTVQVIVGSFVVDGKKSSSNALKSGPSSAAPPQMLTFGAPVTPTSPTSQGPSTESSDEQDHSPFCRGPGPGPGLYNNATQPVHNMPMYHHQLWAGQNHQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00779 384 Pfam Plants and Prokaryotes Conserved (PCC) domain 182 296 IPR005175 -
Pste7g00779 384 CDD DUF296 181 295 IPR005175 -
Pste7g00779 384 MobiDBLite consensus disorder prediction 1 29 - -
Pste7g00779 384 ProSiteProfiles PPC domain profile profile. 176 317 IPR005175 -
Pste7g00779 384 MobiDBLite consensus disorder prediction 302 366 - -
Pste7g00779 384 MobiDBLite consensus disorder prediction 323 343 - -
Pste7g00779 384 MobiDBLite consensus disorder prediction 15 29 - -
Pste7g00779 384 SUPERFAMILY AF0104/ALDC/Ptd012-like 180 296 - -
Pste7g00779 384 MobiDBLite consensus disorder prediction 95 114 - -
Pste7g00779 384 MobiDBLite consensus disorder prediction 302 316 - -
Pste7g00779 384 MobiDBLite consensus disorder prediction 43 120 - -
Pste7g00779 384 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 47 347 IPR039605 GO:0003680
Pste7g00779 384 Gene3D - 182 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00779 Pste-Chr7 7084076 7089657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00779 73 384 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 41.739 2.80e-57 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01608 1 4963488 4965999 Pste7g00779 7 7084076 7089657 PCT