Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00778 TCTCTTTCTCTCTTCACTTTTCTTCTGTCGAAGCAAAAAATGGACTCTAACGGCGTCGTTTCATGGCCGAGGTTGCCGGAAAACATGGACACTTTCGGTCTCTCACAGAAACAGCAACCCGAAGAGGTTCACGTTTTAGCCGTTGATGACAGCCTCGTTGATCGCAAAGTCATAGAACACTTGCTCAAAGTCTTAGCTTGTAAAGTCACTGCTGTGGATAGTGGGTTGCGAGCACTGCAATATCTTGGCCTTTTGGACGAGCAGAAAATGCCCTCTGAAACTAACGATTTTGTTGGTTTAAAGGTGGATCTAATTATCACAGATTACTGTATGCCCGGAATGACCGGTTATGAGTTGCTCAAGAAAATTAAGGTTAACTTGGAACAGGAATCATCCACTTTCAAGGAAACTCCTGTGGTGATTATGTCTTCAGAAAACGTTTTGCCACGCATAGACAGATGTTTAGAGGAGGGAGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGATGTGAAGCGTTTGAAAGATTTCATGACAACAAAGGAGGTTAAGGGTGAAAGCGAAGAAGAAAGGGAAGGGATCAACAAGAGGAAGCTATTGGACACTTCTGATGTGCCAGCATCATCACCACCGTCCATTTCATCATCTACGCTTCCATCTTCACCGTCCTCAGTGATTGACTCTCCGATCAGACGGCTTAAAATGACTAGCACTGATTGATATATACCCCAACAATTAATTTGCGATTTTCTTTTCTCATTCTGTAATGTCTATCTTTATTTATATTAATTAGTATATTTTTTATTTGTTTTTTTTTTCTCTTTTAGGGTTCAAACTGCAATTACCTTCCCGTTAATTGTAACGGTTTTTGTTGCACTACCCTATCTTAATTATCTGTTACTAAGTTATCTTAATTGTTTATATGAAGG 932 0.4002 SLSLFTFLLSKQKMDSNGVVSWPRLPENMDTFGLSQKQQPEEVHVLAVDDSLVDRKVIEHLLKVLACKVTAVDSGLRALQYLGLLDEQKMPSETNDFVGLKVDLIITDYCMPGMTGYELLKKIKVNLEQESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDFMTTKEVKGESEEEREGINKRKLLDTSDVPASSPPSISSSTLPSSPSSVIDSPIRRLKMTSTD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00778 240 CDD REC_typeA_ARR 45 175 - -
Pste7g00778 240 Gene3D - 43 214 - -
Pste7g00778 240 SMART REC_2 43 176 IPR001789 GO:0000160
Pste7g00778 240 MobiDBLite consensus disorder prediction 182 240 - -
Pste7g00778 240 ProSiteProfiles Response regulatory domain profile. 44 180 IPR001789 GO:0000160
Pste7g00778 240 MobiDBLite consensus disorder prediction 206 240 - -
Pste7g00778 240 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 198 IPR045279 GO:0009736
Pste7g00778 240 Pfam Response regulator receiver domain 45 172 IPR001789 GO:0000160
Pste7g00778 240 SUPERFAMILY CheY-like 42 174 IPR011006 -
Pste7g00778 240 MobiDBLite consensus disorder prediction 182 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00778 Pste-Chr7 7081340 7082819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00778 1 232 Response Regulator Gene Family AT1G59940 52.529 5.40e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste7g00778 Response_reg 2.2e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00778 7 7081340 7082819 Pste7g00778 7 7081340 7082819 ECH