Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00761 CTTTTTGTGAAGTTCATAGACCTATCCGCAGGCAAGCAGGCACCAATCGAGGTTCTGATTCTCGGCACTGAGCTCTCTTAAAACCAATAACGGTGAATCAACAATCTCACTATTCTCTTTTTTCCCATCAAAATTCAATTGCTCTATTGTCTCCCTCTTCGCCCACTCAAGCTCCATCATCGTCCACCTCTCTCAGTTCCCTTCCATCAAGGTTCGATCTTGATCTTCTTTTTCCATACCCATTCCTTTCTATACCAACCCCTTTATTCTTCGCCCCATAAAAATCAACCAAAACGCTGAAACACAATATGGGTTGCACCATGAGGGATAAGCACATCAGAGCCAATCGGAGACCCCGATCGGCCAAACCGGACCCTGATTCTTGCGACAAAGATGCCATATCCAAATCAATAGCCGAGACTGGTCTCAAGCCTTTCAAATACCATATGGGTCTCAATGATTCTTCCCAGACTCCCAATTCAAACCCTAATGTGGAGGAAACCGGGTGGGGTTACTGTACAGAGGAACAATTGGAAGAGATTCTGTTGAAAAACTTGGAGTTTATATACAATGAAGCTGTGTCAAAGCTTGTTGCTTTGGGTTATGATGAGGATGTTGCTGTTAAGGCCATACTACGAAATGGGCATTGTTACGGTGGCATGGATGTGCTCACAAATATTTTGCACAATTCCTTGGCGTTTTTGAATAGTAATAATAGTGATGGTGGAGGTGGGTATAGTAATAATAATAGTGGGACTTTGGATGAGTCGGAGCCTGTTTTCTCTGATTTGAGGCAGTTGGAGGAGTACTCTTTGGCCGGTATGGTGTGTTTGTTGCAACAAGTGAGGCCTCATTTGAGCAAAGGGGATGCCATGTGGTGTTTGCTCATGAGTGATCTTCATGTTGGTAGAGCTAGTGCTATGGAGATTCCAGTGCCGGGTAATGGGAGCCCTGCACCGGCTACCGGCGAGGGAGGTGCTAATTCGGTTGGTGTTATGGCGCCAGCTTTGTGTCGGTTTCATGGTGGGTGGGGATTTGGAAATGGGGGAGGCTTGGAGTTTCCTGTGAATGGGATATTTTCTTGTGGTGCAGAGATGAATTTACAGCTGCAAAGAGACATTGAGTTTCCTAAGAGGTTTAATCTTTCTCCTTCGATGAAGTCCTTATTGAAGAGAAATGTTGCTATGTTTGCAGCGGGTTTTAGGGCAAACTCCAAGCAATTGCAGGCACAAACAAAGGCCATTCCTGGCCGGAATACTGCACTTAGTTTGGATTCTTCGGCTGCATCCGGGACAGAAGTCCCAGCTGAGCAGTCTGGAGGAGATTCACATAATCTTGATAGTCAAGATGCTGTGAATTCGGTGCTGAGTAAATTTCGTGATTTGAATCTTGATGAGAATCTAGAGCTAGTGGCAGAAGATCAGAAGGATGAGGTGATAGTCACTTTATTTCATCAGATTAAGGATCTTGAGAAACAGGTTAGCGAGCGAAAAGATTGGGCTCATCAGAAGGCAATGCAGGCTGCAAGAAAGCTAAGCAGTGATCTGACTGAGCTCAAAATGTTGCGCATGGAAAGAGAGGAGACTCAAAAATTGAAGAAAGGGAAACCAGTGCTTGAGGATACAACCATGAAGAGGCTCTCAGAGATGGAAAATGCTTTGAGAAAGGCCAGTGGTCAACTGGACCATGCGAATGCAGCTGTGAGGAGACTAGAAACTGAGAATGCAGAAATGAAAGCAGAGATGGAGGCTTCCAAATTAAGTGCATCAGAGTCAGTGACAGCTTGTTTGGAAGTTGCAAAAAGGGAGAAAAAATGCTTAAAAAAACTACTAGCTTGGGAAAAACAGAAAGCTAAGCTGCAGCAAGAGATTTCTGATGAAAAAGAGAAGATATTGGAGACACAAGAAATATTGGTTCAGATTAGACAATGTCAAAAGGAAGCTGAGGTTAAGTGGAAGGAGGAGTTAAAGGCTAAAGAGGAAGCCTTAGCACTAGTTGAGGAGGAACGGCGCTCTAAGGAAGCCGGTGAGTCTAACAATAAGAGGAAGCTTGAGGCTTTACGTCTGAAGATAGAGATAGATTTCCAGCGCCACAAGGATGATCTACTAAGACTGGAGCAGGAGCTTTCGCGCCTGAAAGCATCTGCTCGGTCTTCTGAGTTGAATCACCAATCAAGCAATTCGCCGACAAGTGAAACTGAGGGTGCAAAGCCACAGAAAGAGACCATTGCTAGGCTGCTTCAAGAATTGGATAATCTGGAGGATTTTTCAGAGAAAGAAGTGAATAGCAACAGAGAATGCATTATATGTATGAAAGATGAAGTCTCCATTGTTTTCTTGCCATGTGCACACCAAGTTATGTGTGCTAGTTGCAGTGATGAGTATGGAAGAAAGGGTAAGGCTGCTTGTCCTTGCTGCAGGGTTCAAATCCAACAAAGAATCCGTGTATTTGGGGCAAGTTCTTAGCTTATTTATAGAAGTTATGTTTCAATGAGACTTGGGCAGGTATACCCTATGAATTTTTACATATGTTTGTGCACTTATTCAGTCGGGGTACTTGTCTCTAAATCTCACATTACACGCTGTGGGTTGAGCATAGTCAGGAATTATTATTATTATTATTTATATAATATATAAATATAAATAAAAACTAAGTCCTGGCATTGGAATGTCTGAAATATAGTTGGTTACTGCCGTTGGCTTGAAAATAAGAAATGAGCATTTGTATTGTTTTGTTTTGAGATCTTTACTTCCTTTCCCTGATAATGTTCAAG 2773 0.4299 MGCTMRDKHIRANRRPRSAKPDPDSCDKDAISKSIAETGLKPFKYHMGLNDSSQTPNSNPNVEETGWGYCTEEQLEEILLKNLEFIYNEAVSKLVALGYDEDVAVKAILRNGHCYGGMDVLTNILHNSLAFLNSNNSDGGGGYSNNNSGTLDESEPVFSDLRQLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASAMEIPVPGNGSPAPATGEGGANSVGVMAPALCRFHGGWGFGNGGGLEFPVNGIFSCGAEMNLQLQRDIEFPKRFNLSPSMKSLLKRNVAMFAAGFRANSKQLQAQTKAIPGRNTALSLDSSAASGTEVPAEQSGGDSHNLDSQDAVNSVLSKFRDLNLDENLELVAEDQKDEVIVTLFHQIKDLEKQVSERKDWAHQKAMQAARKLSSDLTELKMLRMEREETQKLKKGKPVLEDTTMKRLSEMENALRKASGQLDHANAAVRRLETENAEMKAEMEASKLSASESVTACLEVAKREKKCLKKLLAWEKQKAKLQQEISDEKEKILETQEILVQIRQCQKEAEVKWKEELKAKEEALALVEEERRSKEAGESNNKRKLEALRLKIEIDFQRHKDDLLRLEQELSRLKASARSSELNHQSSNSPTSETEGAKPQKETIARLLQELDNLEDFSEKEVNSNRECIICMKDEVSIVFLPCAHQVMCASCSDEYGRKGKAACPCCRVQIQQRIRVFGASS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00761 718 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 649 715 IPR013083 -
Pste7g00761 718 MobiDBLite consensus disorder prediction 1 29 - -
Pste7g00761 718 PANTHER OS05G0141500 PROTEIN 1 713 IPR046934 -
Pste7g00761 718 Coils Coil 592 619 - -
Pste7g00761 718 CDD RING-HC_MIP1-like 659 713 - -
Pste7g00761 718 MobiDBLite consensus disorder prediction 321 345 - -
Pste7g00761 718 Pfam Family of unknown function (DUF6592) 82 205 IPR046527 -
Pste7g00761 718 Coils Coil 444 485 - -
Pste7g00761 718 Coils Coil 500 534 - -
Pste7g00761 718 MobiDBLite consensus disorder prediction 613 636 - -
Pste7g00761 718 ProSiteProfiles Zinc finger RING-type profile. 664 704 IPR001841 -
Pste7g00761 718 Coils Coil 546 566 - -
Pste7g00761 718 SUPERFAMILY RING/U-box 643 710 - -
Pste7g00761 718 SMART ring_2 664 703 IPR001841 -
Pste7g00761 718 MobiDBLite consensus disorder prediction 613 634 - -
Pste7g00761 718 Pfam Zinc finger, C3HC4 type (RING finger) 661 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00761 Pste-Chr7 6936340 6942405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00761 635 714 C3H Transcription Factor Family AT1G73950 35.556 2.13e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01573 1 4883056 4886401 Pste7g00761 7 6936340 6942405 PCT