Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00760 AATAAAAGAAAGAGATAATTTTTCAGTGAAGAAGAAAACTTCAATGATTGTCACTCGTTCTGCTTTGATTCTCCATCTCCAAAACCCACCAATTCGCTACCACTTCTTCTCTCACTTCAACAATGTTCACACCGCATTCTTCAAACCCACTTTTCCTTCTTCTCTGTTCAAACCTCGCTCTTTCTCTCTAACCACTCCCTTTGCAAGTGCCTTTGCATCATCATCATCACAAGGTTCCAATGGCAGAGACACTTTCTTTGCAGAAGAAACTGTTTCGTGGAGTTCACTTGGCCTCTCTGATACCATTTCTCGAGCGCTCTCTAACATTGGCCTCAATAGACCCTCTCTCGTTCAGGCTTCTTCTGTACCGTCTGTGCTGTCAGGGAAGGATGTTATTATTGCTGCGGAGACTGGGAGTGGTAAGACATACAGTTACCTAGTTCCTCTAATTGATAAGCTTAGGGACACCCAGGAACATTCTCTACATGCTGTGTCTGATCAAGAAGTGACCTCACCGCAGAAAGTTCTGCTTGTTCTTTGTCCAAATGTGCAACTCTGTGAGCAGGTAGTGAGGATGGCTAACAGTCTCTGTAAAGATGATGGTGAGATGATAGTTAGTGTGGCAGCCATTTGTGGCAGACAGGGATGGCCGGTTCGGGAACCTGATGTTATTGTGACAACACCTGCTGCCCTTCTGAATTATGTTGACCTTGATAGAAGCCGACGCATGGAATTTATGCGTGGTGTTAAATATGTGGTGTTTGATGAAGCTGATATGCTTCTCTGCGGGAGCTTCCAGAATAAAGTAATCCGCCTGATAAACTTGCTCCGCTTTGATGAAAAGCTCTTGTCTCGATCAAAAAAATCAGTAGGAGAGTTTCATGTGAAACACGAATGCTCCTTGTTATCAGAAGATGCTTTTGAAGGTGAGGAGGAACTTCAAACTAAAGCAATCTCAGAAGAGGATGAAAGTGATAAAGAAGACACTGTTGATATTAATAATGAAGCTGAATCTGTTCGGCAAAGAGACTGGAAGAGGGTGAGGAAAAATTATGACCGTAGTAAACAGTATGTTTTTGTTGCTGCTACACTTCCAGTGAATGGAAAAAAAACAGCTGGAGGGATATTGAAATATATGTTTCCTGATGCTGAGTGGGTTTGTGGAAACTATCTTCATTGTCACAATCCAAGATTGGAGCAAAAATGGATAGAAGTAACAGTTGATACTCAAGTGGATGAACTCATAAAGGCTGTGAATCATGGTTTTAGATCTAAAGATTTGGTTAATGCTGATGGCATTCACAGAACAATGGTGTTTGCCAACACTGTTGAGGCTGCTGAAGCTGTGGCAAAGATATTACTCCGATCTGGGATCGAATGTTCTCGTTACCATAAAAATTGCACATTGGAAGAACGAGCACAGACCTTGGTTGATTTTCACAAAAAAGGTGGTGTTCTTGTATGCACTGATGCTGCTGCTCGTGGTGTTGATATTCCAAATGTTTTACATGTTATTCAGGCAGATTTTGCTACTTCTGCTGTAGACTTTTTGCATAGGGTAGGTCGTACAGCTAGAGCTGGCCAAATTGGACTTGTTACTAGCATGTACACTGAGTCCAACAGGGAGCTTGTCAATGCAGTTCGTCGGGCAGGGGAACTTGGTCAACCTGTGAGTTGGAGTTTGGATGTCATAGAAATTGAAGAT 1705 0.424 MIVTRSALILHLQNPPIRYHFFSHFNNVHTAFFKPTFPSSLFKPRSFSLTTPFASAFASSSSQGSNGRDTFFAEETVSWSSLGLSDTISRALSNIGLNRPSLVQASSVPSVLSGKDVIIAAETGSGKTYSYLVPLIDKLRDTQEHSLHAVSDQEVTSPQKVLLVLCPNVQLCEQVVRMANSLCKDDGEMIVSVAAICGRQGWPVREPDVIVTTPAALLNYVDLDRSRRMEFMRGVKYVVFDEADMLLCGSFQNKVIRLINLLRFDEKLLSRSKKSVGEFHVKHECSLLSEDAFEGEEELQTKAISEEDESDKEDTVDINNEAESVRQRDWKRVRKNYDRSKQYVFVAATLPVNGKKTAGGILKYMFPDAEWVCGNYLHCHNPRLEQKWIEVTVDTQVDELIKAVNHGFRSKDLVNADGIHRTMVFANTVEAAEAVAKILLRSGIECSRYHKNCTLEERAQTLVDFHKKGGVLVCTDAAARGVDIPNVLHVIQADFATSAVDFLHRVGRTARAGQIGLVTSMYTESNRELVNAVRRAGELGQPVSWSLDVIEIED 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00760 554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 525 IPR027417 -
Pste7g00760 554 CDD DEADc 88 269 - -
Pste7g00760 554 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 87 537 - -
Pste7g00760 554 SMART ultradead3 96 387 IPR014001 -
Pste7g00760 554 Pfam DEAD/DEAH box helicase 103 267 IPR011545 GO:0003676|GO:0005524
Pste7g00760 554 Gene3D - 55 365 IPR027417 -
Pste7g00760 554 SMART helicmild6 433 513 IPR001650 -
Pste7g00760 554 Pfam Helicase conserved C-terminal domain 420 513 IPR001650 -
Pste7g00760 554 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 108 368 IPR014001 -
Pste7g00760 554 Gene3D - 374 541 IPR027417 -
Pste7g00760 554 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 396 554 IPR001650 -
Pste7g00760 554 CDD SF2_C_DEAD 384 522 - -
Pste7g00760 554 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 77 105 IPR014014 GO:0003724
Pste7g00760 554 MobiDBLite consensus disorder prediction 299 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00760 Pste-Chr7 6932974 6940546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00760 327 539 Eukaryotic Initiation Factors Gene Family AT5G11200 28.049 3.44e-14 73.2