Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00752 CTTTGGTTACTTTTTCTTCATCTTCTTCACAATTTTTTGACTTTTAATATGGGAGGGGCATCACTGCCGCCAGGATTTCGTTTCCATCCAACTGATGAAGAACTACTGGGATACTACCTTAAAAGAAAAGTAGAGGGGCTTGAAATTGAGCTTGAAGTTATACCCGTCATTGATTTTTATAAATTCGATCCATGGGAGTTGCCAGAGAAGTCTTTCCTTCCAAAACGGGATTTGGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGGTATTGGAAAGCCACAGGAAAAGACAGAAAAGTGGTGTGCCAGTCTAATCCATCCACTGTTACAGGGTACCGCAAGACCTTGGTTTTCTATCTTGGGAGGGCTCCTTTAGGGGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCTGTGATGACCTTGGCCAACCTACACCATCTTTCCAGGGTGGTTTTGCTTTGTGCCGGGTCATTAAGAAGAATGAGATGGCAAGTGCTTCCTCACAGGGAGAACACAAGAGCAAAAGGGCTGCAAGCAGTTCCATCAATGGGACTGACACCTCAATGAGATTCACTAGCGAACCATTCAGCAACTCTGGTGATGCTTCCTCTCAAGCAAGTCACCTGAACAATGAGAGTCGTTATTCTAGCCCTATTACCTCTCCATACAATGTGGCTCCAATGGGAGAGTTTAACCAAGCTTCTGTGGAAACCAATCCTTCAAACTTCTGGATCTCCCCTGATATGATTCTTGATTCTTCAAAGGACTACCCTCAATTACAAGATGCCGTTGCTGAATATTTTCCACGGTATGACTTACCAAGTGTGATGACACCATGGCAATCATTGGAACATCCAGAAACTTCATCTAGTTTGTCCAACCCAAATTTCAATGGGGAAGTTGAATTTGCTGATAATCTCAGTCAAATAGGCTGCATGTCACATTACCCTAGACAATGGAATTCCATGGACTTCTATGGAAATGCTGATGTTCCTTATGAAGTTTACGATCCATTTAACTCAATCTCTATCCAGAACCCTTTTAGAAGCTGA 1098 0.4308 LWLLFLHLLHNFLTFNMGGASLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSNPSTVTGYRKTLVFYLGRAPLGDRTDWVMHEYRLCDDLGQPTPSFQGGFALCRVIKKNEMASASSQGEHKSKRAASSSINGTDTSMRFTSEPFSNSGDASSQASHLNNESRYSSPITSPYNVAPMGEFNQASVETNPSNFWISPDMILDSSKDYPQLQDAVAEYFPRYDLPSVMTPWQSLEHPETSSSLSNPNFNGEVEFADNLSQIGCMSHYPRQWNSMDFYGNADVPYEVYDPFNSISIQNPFRS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00752 365 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Pste7g00752 365 ProSiteProfiles NAC domain profile. 22 175 IPR003441 GO:0003677|GO:0006355
Pste7g00752 365 MobiDBLite consensus disorder prediction 180 232 - -
Pste7g00752 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 225 - -
Pste7g00752 365 FunFam Nac domain-containing protein 86 31 178 - -
Pste7g00752 365 SUPERFAMILY NAC domain 10 175 IPR036093 GO:0003677|GO:0006355
Pste7g00752 365 Pfam No apical meristem (NAM) protein 23 152 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00752 Pste-Chr7 6863152 6864917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00752 17 304 NAC Transcription Factor Family AT4G17980 57.192 1.03e-109 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste7g00752 NAM 1.6e-37 No_clan