Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00728 AAAGTACACCTCTCTCCTTGTATTGTCTGTCCCAGAAAATCCAGGTTGTTTCACTTGCTCCATCACACTCCACAACTGATTCCCTTACTATGAAAACACTTTCATATGGGACCAAGATGATAGTTTACTCCTTTAAAAGCAGTCTACAACTGAGATTATATTATACCATTAGTCACAATTATCTGTAATTTCTTGCAATATCAAGGATCACAACAAAACCGCAATTTAGAACTTTGAGAAGAACCATACAAGATTGAGCCACCATGCCATTTGGTTTGGTCTCAGCATGGAACAAGCGTAGAAGAAGCAAGTCTCAAGATCATTCAGACCCTTGGATTTATAAACCTGCAGAGTTTTGGCAGCTTGAAGATCAAACACCACAACTTACAAAAAGGAGGCATATATCATCTGTTTTCACACTCAAGGAGATGCAAGAGGCAACATGTTCATTCTGTGATGATAATCTACTTGGAAAAGGGGGGTTTGGCAGGGTCTACAAGGGAACTTTGAAGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGCTTCCAGCAATTAAAGCAGCAGAAGGGGAGCGTGAATTCCGTGTAGAGGTTGACATATTAAGCAGACTTGACCACCAAAATCTTGTTTCTTTAATAGGATACTGTGCTGATGGGAAGCATAGGTTTCTAGTTTATGAATATATGCATAATGGGAACCTGCAAGATCATCTAAATGGAATTGGAGCAAGAAAAATGGATTGGCCTCTAAGACTCAAAGTGGCATTGGGAGCTGCAAAAGGGCTTGCTTATCTCCATTCAAGTTCTTGTCTTGGGATTCCTATTGTTCATAGAGACTTCAAATCCACCAATATATCTGATTTTGGGCTAGCCAAACTAATGCCCGAAGGACAAGAGACACATGTGACTGCTAGAGTACTTGGTACATTTGGCTATTTTGACCCTGAGTACACATCGCTTTTGACAGGACGTCGAGCTGTAGATCGAAACCATGGTTCAAGTGATCAAAATCTTGTATTACAGGATAGGAAGAAGCTTCCTAAGGTGATAGATCCAGATATTGCTCGAAATTCTTACACCATTGAGTCTATATTCATGTTTGCAAATTTGGCATCACGATGTGTTCGTAGTGAGAGTAATGAGAGACCTTCAATGGTAGATTGTCTCAAAGAAATCCAAAGCATTATCTATACAAATTCAAAGGGCTTGGGAATGGTTATGCAAAGCTTGAGAATGATC 1241 0.3989 MPFGLVSAWNKRRRSKSQDHSDPWIYKPAEFWQLEDQTPQLTKRRHISSVFTLKEMQEATCSFCDDNLLGKGGFGRVYKGTLKSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHQNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGIGARKMDWPLRLKVALGAAKGLAYLHSSSCLGIPIVHRDFKSTNISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSLLTGRRAVDRNHGSSDQNLVLQDRKKLPKVIDPDIARNSYTIESIFMFANLASRCVRSESNERPSMVDCLKEIQSIIYTNSKGLGMVMQSLRMI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00728 326 Pfam Protein kinase domain 66 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00728 326 PANTHER OS01G0750732 PROTEIN 42 310 - -
Pste7g00728 326 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Pste7g00728 326 SUPERFAMILY Protein kinase-like (PK-like) 40 310 IPR011009 -
Pste7g00728 326 ProSiteProfiles Protein kinase domain profile. 63 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00728 326 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Pste7g00728 326 Gene3D Phosphorylase Kinase; domain 1 29 141 - -
Pste7g00728 326 Gene3D Transferase(Phosphotransferase) domain 1 142 231 - -
Pste7g00728 326 Gene3D Transferase(Phosphotransferase) domain 1 232 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00728 Pste-Chr7 6686132 6693688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00728 50 309 Receptor kinase-like Gene Family AT3G58690 38.667 3.84e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Pste7g00728 Pkinase 6.2e-29 CL0016