Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00727 AGATAAACAGAAGAAAAAAAAATTTGCATAGCTCCAAAAAAGGGATCAGATCATGAGAGAGAAGAAACATGTCACTGATCTAGTTCAGTACCTATATATAGACCCATCAGCTTTATTTCACTCTTTTCTCTGTGTGTGCAACAGTCTCTGTGAGCTGAAGGTATAGTCTGCAGCTAAAAATATTGAAGCAAGAACGGCAGAAGAAGGAAGATTAAGGTAACCAATTCACAAGAGTCCAGTTTTTTGAATTCTGAAGCAAAATCACCCATGAAATTTTACATGCCTCAGAGTGCTTTGGGATTTAATTGGTATTAAACTCTGTTCTGCTTCCTGGCATTTTCTTCTTCAGTTGGCTAGCAAGAACTGAACCTGCGTAGTCCAACATATCTACTCCAATAAAATTTAGCATACCGTTAAAGTTAACATTAAGGTACTTATCATACATATAATTAGATCCATAATTCCCATTAAACAAGCCAGAGTGTTTGTGGTATTTAAGGAGTGGGTTTGACCGAGATTGTTGACTGCTATATAGAAACCTTTCCTCTCCTTCCTGTAAAAAATCTCCGTAGTTGATTCAAACAACACTAGATGACTGTGGATGAAGTTGGTAGTAGCTCTGAGTGGAGCAAAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAATTCATCCTGAGGATACTTCAGACCGATGGGAGAAGATAGCCGCTGACGTGCCAGGGAAAACCTTGGAAGAGATTAAACACCACTATGAGCTCTTGGTTGAAGATGTTAACCAGATTGAATCTGGTCGTGTGCCTCTGCCATCTTATAATTCTTCAGAGGGCTCAACAAGCCAGGCTAGTGATGAAGCAGGCAAGAAGGGAGGCCATTCTTGGAATAGTAACAGTGAATCTAATCATGGAACTAAGGCGTCAAGATCTGATCAGGAACGACGAAAGGGCATTGCATGGACAGAGGATGAACACAGGTTATTTCTTCTAGGCTTGGAAAAGTATGGAAAAGGTGACTGGCGAAGTATATCAAGAAACTTTGTGGTGACAAGAACACCTACACAAGTAGCAAGTCATGCCCAAAAATACTTCATTCGATTGAACTCGATGAACAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGTGTCAACAATGGAGATGTTTCAGCACCTCAAGGACCAATTACTGGTCAAACAAATGGTTCTGCAGCAAATTCTGCAGGAAAATCAACCAAACCAGCCCCTCCAACCCCAACTGCTGCCCCTGGTGTAGGAATATATGCTGCTCCTACCATTGGACAACCTATAGGAGGACCCCTTGTATCTGCAGTTGGCACCCCAGTGATTCTTCCTCCCCCGGCACACATGGCATTCGGTCTCGGAGCCCCGGTTACTGGCGCAGTGGTTCCTGGAGCACCAATGAACTTGGGTCCTGTTCCATACCCCATGCCACATACATCTGCTCATAGATGAAGTTCTGTTCATAGGCCTAATGTACAAAACAAAGATAAACAGCAATCTAGATTGGCTTCTGAACTTAATGTAAGGGTCTGCTTGAGTGAGCTTCTCTAGAAGTACTTCTAGGAGAAAAAAGTCAAAACAACTTCTCCATAAGCTTTTTACAGGCTAATTTTTAAAGTTTCACATGTTTTAGAAAAATTATATGAGATGTTTCTAACATATTAACTAAAATTAGTTTGAAAAAAGTTTTACATCATTTAAAAAACTCATGGAAAAGTTTTTAAACTTTTTTCTTTATATTTTTCTCTCCTTGAACCACTTTTAGAGAAGCTTACCTAACCAGACACTAATTCTTCTTTTTCTATTTCTACAGTTTCTTATATCTGAGAGTTTAATGCTCCACCAATTATTTCAAATAAGTGATACCCTGAATGAAGCATTAGAATGTATCTACATCGGCTGCCATGGATGGAATATGTGACAGCCTTGACATACAACAGCATGAAAGTAAGGTTGTTTAGTAGACATTTAAATTGTTGTAGTTAGTCTTATAAAGTTGGCAAGCTGTAGAGGAAGGTTCTGGGGCTTTGATATGTTATATTGCTGTATTTTGTCTTGGTTCTGATTTTCTCTAGGGTCTAAATTTTCCCATTTAGCTACTTATTATCAGGTTAGTTGCTATGATTAACATGATACATTATGGAAATACTAGTCCATTCTGACAACATTGCCATCAAAATGTTTCTACAATAAAATGAAAAATCCTAACATTGCTAGG 2239 0.389 MTVDEVGSSSEWSKEQDKAFENALAIHPEDTSDRWEKIAADVPGKTLEEIKHHYELLVEDVNQIESGRVPLPSYNSSEGSTSQASDEAGKKGGHSWNSNSESNHGTKASRSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSAPQGPITGQTNGSAANSAGKSTKPAPPTPTAAPGVGIYAAPTIGQPIGGPLVSAVGTPVILPPPAHMAFGLGAPVTGAVVPGAPMNLGPVPYPMPHTSAHR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00727 293 ProSiteProfiles SANT domain profile. 121 169 IPR017884 -
Pste7g00727 293 SUPERFAMILY Homeodomain-like 115 170 IPR009057 -
Pste7g00727 293 MobiDBLite consensus disorder prediction 1 20 - -
Pste7g00727 293 MobiDBLite consensus disorder prediction 184 216 - -
Pste7g00727 293 FunFam transcription factor MYB1R1 119 170 - -
Pste7g00727 293 CDD SANT 11 58 IPR001005 -
Pste7g00727 293 MobiDBLite consensus disorder prediction 68 106 - -
Pste7g00727 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 117 167 IPR006447 GO:0003677
Pste7g00727 293 Gene3D - 4 71 - -
Pste7g00727 293 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Pste7g00727 293 MobiDBLite consensus disorder prediction 184 225 - -
Pste7g00727 293 FunFam Transcription factor SRM1 4 71 - -
Pste7g00727 293 PANTHER TRANSCRIPTION FACTOR KUA1 8 288 - -
Pste7g00727 293 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Pste7g00727 293 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Pste7g00727 293 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pste7g00727 293 SMART sant 8 60 IPR001005 -
Pste7g00727 293 SMART sant 117 167 IPR001005 -
Pste7g00727 293 Gene3D - 119 171 - -
Pste7g00727 293 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Pste7g00727 293 CDD SANT 120 165 IPR001005 -
Pste7g00727 293 MobiDBLite consensus disorder prediction 67 117 - -
Pste7g00727 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 169 IPR017930 -
Pste7g00727 293 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00727 Pste-Chr7 6674341 6681254 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g00727 Myb_DNA-binding 2.1e-11 CL0123