Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00719 GCAACCATTTCTTCCTTGGTGAAATTGTTGGTGCCCCCCAGAAGAAGGGTAGTGTTGGAATATTTAGCTTTGAAGAAGTGGCAGAAAAGGTTCATTGACCTTTTTTAGAGGCTTATACTTGTGGTCCGTAACTGCTGATGGCAACTGTTCGGTGGTCACAGGAAGCACCCTCCAAAGCCAGCACTTAAGCTCCCTCTTTCCTTTCTCTTCCTTCTCAAGCCTCATTTCTATTCACCCTTCTGTTTTATTAACAATGCAATAAGAGGACAAGCTTAGCAATGGAATTCAAGAAGCATTTTCTTTTATGCCAAGAGGAATTGGGTGCTGAAAAGTGGTATTGATTGATCTGTTACTTTCTATGGGAGACTGAGAACGATGCCAAGCCAGCTATGGTTTTCACTGCCAATGATTTACAAGAATGGAAAGATTTTCCCAAAGGACTCAAGGTTCTTCTCCTTGAGGGAGACAACATTTCTGCTGCCGAGATAAGGGCAAAGCTTGAAGCCATGGACTATAATGTTTCTACCTTCTGTGACGAGAATGAAGCCTTGTCAGCAATCTCAAGTAGACCTGAAAGCTTCCATATAGCCATAGTGGAGATTAGTTCAAACAGTGGCCAGGGAGGTCTCAAATTTCTTGAGAATGTCAAGGACCTGCCAACCATTATGACTTCAAACAAACATTGCTTGAACACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAATTCCTCAGCAAACCACTCTCTGAGGACAAGCTCAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAGTGCTGGGGCAAGCATCCTGTCTGAATCACTTAAACCAGTCAAGGAATCTTTAGTGTCCATGTTGCAGCTCCAAACAGACAATGAGCAACATGAAACTCAAGTATCCATGGATATAGAGAAAGTATCCAGGTTTACTAACAATGATCCTGATAATGATCTCAATCAGTCAGCTGGAAATGATAAATATCCAGCTCCTTCTACCCCACAATTGACACAAGGGATAAGATTGTTGGATGATGGTGATTGCCAGGAGCAGACAAATTGCTCAACAGAAAAAGAAAGTGGGGAACATGATGGAGAATCTAAATCTGTCGAAACTACATCTGGAAATTTGAATGCTGAAACTGAAAGCACTCCTGAACAAAGGAAATCTGAAATTACTTTGGCTAGGGAGGAAGTGGATTTAGTTGATGCTTCCAAGGGTGAGAGTGTTGCTTCTCCTCATACACAAAAAAGAAAGGTTCCAAGTAGCACTGACAAAAATACCAAATCTGCAAATAAAGTAGGTGTTCATAGTGATTCATATGAGACAAGAGCAAATCGGAAGAAGATGAAAGTAGACTGGACACCTGAGTTGCACAAAAAATTTGTGAAGGCAGTGGAGCAATTAGGCATTGATCAAGCCATTCCTTCTAGAATATTGGAATTAATGAATGTGGAGGGTTTGACAAGGCATAATGTAGCAAGCCATCTTCAGAAGTATAGAATGCATAAGAGACAAATCTTGCCCAAGGAAGAAGACAGGAAATGGTTGAATCAAAGAGAAAGGAGCTACTGTGTTCAAAGACCCATTATGGCCTTTCCTCCATATCATTCTAATCCCACCCTACCTCTGGCTCCTGTGTATCCCATGTGGGGACAATCTGGCACTCAAACGGCTGGCATGCAGATTTGGAGCTCTTCTGGTTATCCCATGTGGCAACCTACTGCAGAAAGTTGGAACTGGAAACCGTTTCCAGGGATGCATGCAGATGCATGGGGCTGTCCAGTGTTACCAATACCACCTCCTCAAGCTCCTTTTCCCTACTCTCAGAATATGCCTGCGTTGCTCAATGCTGATACAGCAGATCACAAGTTTACCATGACAGAAAATTCCATTGAGCATTATCCGGCAGAGGAGGTGGTTGACAAGGTTGTGAAAGAGGCAATAAGCAAACCATGGCTACCCTTGCCCTTAGGCCTGAAACCTCCTTCCACAGATAGTGTGTTAGCTGAGCTATCAAGGCAAGGCATTTCCAATATCCCTCCTGGCAGCAAGGGTTCAAATTCAGGCTGACATGGATGCATGCACCAAATCAAAGAGTGGTTCTGATGGTGACCAACTAGAAGAGGGTCCACCTGATGTCAATTATTTTTGTTTTCTCAAGTGTATGAGGTTCCAACTAATAGTTTGGTGGGATGTTGGGACCATTATTTTGCCTTATTTGCCCCAGCACCCCTCACCAAACAATTTAAGGTCTTTCCTATGGTGTTGTGTTGTCAGGCCGTACAAATCTTACCATGAAGCAACAACCAAAGTAGTCATTGATCCTATCCGAAATCACATGCCAAAACAAGGCAACAAATAATAAATAGAGAAATTCAGCTGCTTTAATGCAGTGCGGGACCCCTTAGGCAACTTAGCCGGTTGAGATATAGCCACACTTCTCTTAATGCTTTCCACACAGTTTTGTGGTTGTAAATACGTGCAAACTTGTGATGGGGATATTGTTGTAAATGTGCCACTTTGGGGGACATAAAGTATACCCATAACAGTGATTTTTTAGGGAGGGAAGGGGGGCTTTGTTTTTGTGCTGTAGGGTGTGGGGTGCCTAATAATAATGATTGAGAGGATAGGATACACGATGTGAATAAAGATGAGTACATGACTTTGACGGAAGCTAACTCTTTCTTCTTGAATTTTTC 2704 0.4279 MVFTANDLQEWKDFPKGLKVLLLEGDNISAAEIRAKLEAMDYNVSTFCDENEALSAISSRPESFHIAIVEISSNSGQGGLKFLENVKDLPTIMTSNKHCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFSAGASILSESLKPVKESLVSMLQLQTDNEQHETQVSMDIEKVSRFTNNDPDNDLNQSAGNDKYPAPSTPQLTQGIRLLDDGDCQEQTNCSTEKESGEHDGESKSVETTSGNLNAETESTPEQRKSEITLAREEVDLVDASKGESVASPHTQKRKVPSSTDKNTKSANKVGVHSDSYETRANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMNVEGLTRHNVASHLQKYRMHKRQILPKEEDRKWLNQRERSYCVQRPIMAFPPYHSNPTLPLAPVYPMWGQSGTQTAGMQIWSSSGYPMWQPTAESWNWKPFPGMHADAWGCPVLPIPPPQAPFPYSQNMPALLNADTADHKFTMTENSIEHYPAEEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISNIPPGSKGSNSG 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00719 561 MobiDBLite consensus disorder prediction 180 210 - -
Pste7g00719 561 FunFam Two-component response regulator 316 379 - -
Pste7g00719 561 SUPERFAMILY CheY-like 16 135 IPR011006 -
Pste7g00719 561 Gene3D - 18 139 - -
Pste7g00719 561 MobiDBLite consensus disorder prediction 532 561 - -
Pste7g00719 561 MobiDBLite consensus disorder prediction 255 275 - -
Pste7g00719 561 NCBIfam myb-like DNA-binding domain, SHAQKYF class 320 375 IPR006447 GO:0003677
Pste7g00719 561 Pfam Myb-like DNA-binding domain 323 372 IPR001005 -
Pste7g00719 561 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 554 IPR044825 GO:0003700|GO:0045893
Pste7g00719 561 SMART REC_2 18 128 IPR001789 GO:0000160
Pste7g00719 561 MobiDBLite consensus disorder prediction 539 561 - -
Pste7g00719 561 Gene3D - 316 378 - -
Pste7g00719 561 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Pste7g00719 561 MobiDBLite consensus disorder prediction 296 310 - -
Pste7g00719 561 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Pste7g00719 561 FunFam Two-component response regulator-like APRR2 17 143 - -
Pste7g00719 561 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 317 376 IPR017930 -
Pste7g00719 561 SUPERFAMILY Homeodomain-like 319 377 IPR009057 -
Pste7g00719 561 MobiDBLite consensus disorder prediction 180 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00719 Pste-Chr7 6581313 6588068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00719 1 555 Response Regulator Gene Family AT4G18020 49.398 1.06e-142 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pste7g00719 Response_reg 1.6e-08 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01467 1 4634324 4640419 Pste7g00719 7 6581313 6588068 PCT