Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00704 TTTTGAGTACTTTTATAATTCTTTCCTACACATGGCTCTCTCTCTTTTGTATCCTCTTCTAGTTCTTGCCACCTTTCTCTTCATGCAAACTCTCGCAGATACTTCATTTGTTCAATCTCGTGCAGCATATTACCCTAATTCTCAAGAAAATGGCACAGACGTTGGTGCATGTGGATTTGGTTCCTTTGGTGCCACCGTTAATGGTGGGGACGTATCAGCTGCATCTAATCTTTATCGAAATGGTGTTGGCTGTGGAGCCTGTTACCAGGTGAGATGTACCAACAGTGCTTTTTGCTCAGGCAACGGTGTCACCATAGTTATAACTGACCAAGGCTCAGGTCATAACACTGACTTCATTCTCAGCCAACGAGCCTTTGGTAGGATGGCCCTGAACACTGACGCAGCTGCTTCTCTATTAGCTCTTGGCGTAGTTGATATTCAATATAGACGTGTTTCATGCAGCTACCCAAACAAAAACATTACAGTTAAGATGCATGAGAGCAGCGACAACCCTCACTATTTGGCTTTTGTCATATGGTTTCAACAAGGGAGTAGAGACATAACTGCTGTGCAGCTTTGCGAGACTCAGAACTTTGTGTGCAAGTTACTGGATCGGAGTCATGGGGCAGTGTGGACAACTGCTGCTCCACCGAGGGGACCTTTGTCATTAAGGATGTTGTTTAGTCCAGAGGATGAGGGAGAAGAAACATGGGTCGTTCCTGTTAATAACATCCCACAAGACTGGAAGGCTGGACAAACATACGACTTGGGGGTACAAGTGGACCAATAGGCAATTCATAGAGAACCAGCACAAATTATTAGTAATTTGCTATTGCCTGTAATCAAATAATGAAATAATTATTTTAAGTTCTGTCAATTTACCCTTTATTATTTTAAGTTCAGTAGTCAATTTATTTTATTTTATTTTCCCTCCAATAATATTTTTTTTTTTTTTTTATAATCCCAAGTAGTGAAGACATTCTATGATCTTAGTACATGTGCATGTAAACAAATCCAACTCACGGTTTATTTCACAAGTTAAAATAAAAATATATATGTA 1060 0.3981 MALSLLYPLLVLATFLFMQTLADTSFVQSRAAYYPNSQENGTDVGACGFGSFGATVNGGDVSAASNLYRNGVGCGACYQVRCTNSAFCSGNGVTIVITDQGSGHNTDFILSQRAFGRMALNTDAAASLLALGVVDIQYRRVSCSYPNKNITVKMHESSDNPHYLAFVIWFQQGSRDITAVQLCETQNFVCKLLDRSHGAVWTTAAPPRGPLSLRMLFSPEDEGEETWVVPVNNIPQDWKAGQTYDLGVQVDQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00704 252 CDD DPBB_EXLB_N 27 143 - -
Pste7g00704 252 PANTHER EXPANSIN-B3 12 249 - -
Pste7g00704 252 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Pste7g00704 252 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576
Pste7g00704 252 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Pste7g00704 252 SUPERFAMILY PHL pollen allergen 148 245 IPR036749 -
Pste7g00704 252 SUPERFAMILY Barwin-like endoglucanases 14 147 IPR036908 -
Pste7g00704 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 148 IPR007112 -
Pste7g00704 252 Gene3D - 13 143 IPR036908 -
Pste7g00704 252 Gene3D - 144 246 IPR036749 -
Pste7g00704 252 Pfam Lytic transglycolase 64 138 IPR009009 -
Pste7g00704 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 162 246 IPR007117 -
Pste7g00704 252 Pfam Expansin C-terminal domain 150 229 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00704 Pste-Chr7 6408163 6410254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00704 5 245 Expansin Gene Family AT4G17030 42.562 5.64e-59 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01441 1 4545876 4547601 Pste7g00704 7 6408163 6410254 PCT