Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00665 ATGAGTGGTTTGAGTTTGAGTCTGGTAGAGTGGCTTAGACCCCTTGTTCAGACCAATGCTTGGGATTATGTAGTTGTTTGGAAATATGGTGATGACCCAACTAGGTTTATTGAGTGGATAGGTTGCTGCTGTAGAGGAAGTTGCAGTGTGAACATTGACTTGGTGAAGTCCAAAGAAGAAAAGGGTGAAGTGTGCCACTTGGCTCCAGTTTGTAGGGATAACTATCTTCAGCATCCAGTTGGAACAAAGGCCTGTGAGGCTCTTGCTCAGCTTCCTTTTGCACTGTCTCTCTATTCAGGTGTGCATGGAGAGGTTGCCATATCACAACAATCAAGATGGCTTACACAGGGTTCGAATGGAACGCAAGTTCTGATCCCTATTGTTGGTGGTCTAGTCGAGCTCTTCACTGAAAAGCTGATTCCAATGGATATGAATATTGTAGAGTTCATAAGAGCACAAGGCTGTGTCTTTTTAAAGCAAGAAGCCAAATCTGCACAGAGCTACACCAATCTGAATATCAATGAACATCTTCCATTAAGGGAACAATACTCACATTGGTGGCCAACACTAATGTCAACTTTAACTCCTAGTGTCCATCATACTGCAACCAAACAGTGCAGTTCCCATCCAAGCATTGAAGGACCCCCCAATGGGTCTAATCCTTCAACTGAAGAACCATCATTTGATTCAAAGTTTGTTGGTTTGACTCCACATGAATATCTGAAACCACCAGTTAAAATATCTCCCATCCCCAAAACTAAAACCCCCAAGTACAGTAAAACTTCAGGGAAACAGCAGAGAAATTTGAGTTCTAATTGTAGCAATGAGGAAGATGATATATCAAAATCAGTTAAGGAGCCTCAGAAGGAAGTTTACCAGGCTAAAAATCTTGTCACAGAGAGAAATAGGAGAAACAAGATAAAAAAAGGGCTCTTTATTCTGCGGTCTCTAGTACCAAAGATAACCAAGATGGACAGAGCTTCAATTCTTGCTGATGCAGTTGACCATATAAAGGAATTGCAAACACAATTAAGAGAGCTCAATGATGAGGTCAGGATTTTGGAACTACAGGACTGTGAGAAGAACACACCACGATTGAGGATGCCACTAGGCAAGGAACAAGAAGGAATCAAACGTAACCCTTTTGACCAAAGTTCATCTGATTGCACTGAAAAGATGAAGATGGAGGTGCAAGCAGAAGTGCATCACATTACTAAGAAAGATTTCTTGATTAAGTTATACTGTGAGCAAAAGCAAGCTGGGTTCTCAAAGTTAATGGAAGCTTTAGATTCAATTGGACTGCAGGTAGACAGTGCCAATGTGACCACATTTGATGGAAAAGTCCTGAACATTTTGACGGTTAAGGCAACCAAGCAGGATATTCACCCAAAGAAACTGAAAGAGTATTTAATACAGAAGACAAGTGATGATAGACAGATTAGCAAACAAATTCAGGAACATGGTGACATGAAGAGTTCAAAAAAGTAA 1488 0.4079 MSGLSLSLVEWLRPLVQTNAWDYVVVWKYGDDPTRFIEWIGCCCRGSCSVNIDLVKSKEEKGEVCHLAPVCRDNYLQHPVGTKACEALAQLPFALSLYSGVHGEVAISQQSRWLTQGSNGTQVLIPIVGGLVELFTEKLIPMDMNIVEFIRAQGCVFLKQEAKSAQSYTNLNINEHLPLREQYSHWWPTLMSTLTPSVHHTATKQCSSHPSIEGPPNGSNPSTEEPSFDSKFVGLTPHEYLKPPVKISPIPKTKTPKYSKTSGKQQRNLSSNCSNEEDDISKSVKEPQKEVYQAKNLVTERNRRNKIKKGLFILRSLVPKITKMDRASILADAVDHIKELQTQLRELNDEVRILELQDCEKNTPRLRMPLGKEQEGIKRNPFDQSSSDCTEKMKMEVQAEVHHITKKDFLIKLYCEQKQAGFSKLMEALDSIGLQVDSANVTTFDGKVLNILTVKATKQDIHPKKLKEYLIQKTSDDRQISKQIQEHGDMKSSKK 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00665 495 MobiDBLite consensus disorder prediction 201 229 - -
Pste7g00665 495 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 202 472 - -
Pste7g00665 495 MobiDBLite consensus disorder prediction 243 286 - -
Pste7g00665 495 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 10 152 IPR025610 -
Pste7g00665 495 Gene3D - 282 358 IPR036638 GO:0046983
Pste7g00665 495 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 357 IPR036638 GO:0046983
Pste7g00665 495 Pfam Helix-loop-helix DNA-binding domain 298 341 IPR011598 GO:0046983
Pste7g00665 495 MobiDBLite consensus disorder prediction 254 277 - -
Pste7g00665 495 Coils Coil 330 357 - -
Pste7g00665 495 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 291 340 IPR011598 GO:0046983
Pste7g00665 495 SMART finulus 297 346 IPR011598 GO:0046983
Pste7g00665 495 MobiDBLite consensus disorder prediction 476 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00665 Pste-Chr7 6080852 6083819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00665 7 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 29.872 4.14e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00665 bHLH-MYC_N 1.5e-14 CL0161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00665 7 6080852 6083819 Pste7g00665 7 6080852 6083819 ECH