Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00637 TACTATAAATATGACCCCATATCTATGCTTCCTATCACACAAGGCATTCTATCATTAAATACTCATTCCTGTTTCATATCCCCCTTGAGAATTTGTCATTTGGACATGGAACTTAGTTTTAAGCACCAACTTTGCCTTATTTGTGTCATGCTTCTTTTACCTGCACTTTGTAGCTCACAGGACTCTTTTACAGACTCCAGAGCAACTTATTATGGTAGCCCTGATTGCTATGGGAATCCAAGGGGAGCATGTGGCTTTGGTGAATATGGAAGGACCGTGAATGATGGAAGTGTGGCAGGAGTGTCTAGGCTATGGAAGAATGGAAGTGGGTGTGGTGCATGCTATCAGGCAAGGTGCAAGATACCACAATATTGTGATGAAAATGGAGCATACGTGGTGGTAACAGACTATGGTGAGGGAGACAGAACAGACTTCATCATGAGCCCACGCGCCTACTCAAGATTGGGACGCAACGCAGCTGCAGCTGCAGAGTTGTTCAAATACGGTGTAGTGGATATTGAATACAGAAGGGTCCCCTGTAGTTACACTGGCTATAATGTCGTGTTTAAGGTCCATGAACACAGCAGAAACCCTGACTACTTTGCTGTCGTCGTTCTCTATGTAGATGGAATGTACGACGTCACTGCTGTTCAGTTGTTTCAGGAAGACTGCCAGGAATGGAAGCCAATGCGCAGGGCTTTTGGGGCAATGTTTGACTACAGCAACCCACCAAGGGGTGAAATATACTTGAGGTTTCAAGTAAGTGGCAGTGCTGGGCTTTATTGGGTGCAGTCCAAGAATGCTATCTCTAGTGATTGGACTGCTGGAACAACATATGACACCATGGTTCAGCTTAATTAGAAAGCCCAAAGCACTTTGAGATCCCAGGAATCGTGTAGAAATAGATAGTCACCAGAATTCAATTTGTTACTGTTTTTCTGATTAGTGTCACTCTAAGAATGTTTGTGTTTACTGCTGTATGTGTCTCTTATCTTGGGACTAAAATAATGGTGATTCATGTACTTTTCATCGTTAGATTACATGAATTTTGAATGAAATAAATGTAGTAACCTTTTCCTTCATTGGTATGTCGCTGCCATTGC 1103 0.427 MLPITQGILSLNTHSCFISPLRICHLDMELSFKHQLCLICVMLLLPALCSSQDSFTDSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAGVSRLWKNGSGCGACYQARCKIPQYCDENGAYVVVTDYGEGDRTDFIMSPRAYSRLGRNAAAAAELFKYGVVDIEYRRVPCSYTGYNVVFKVHEHSRNPDYFAVVVLYVDGMYDVTAVQLFQEDCQEWKPMRRAFGAMFDYSNPPRGEIYLRFQVSGSAGLYWVQSKNAISSDWTAGTTYDTMVQLN 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00637 278 PANTHER EXPANSIN-B3 39 276 - -
Pste7g00637 278 Gene3D - 46 172 IPR036908 -
Pste7g00637 278 CDD DPBB_EXLB_N 56 172 - -
Pste7g00637 278 PRINTS Expansin/Lol pI family signature 259 273 IPR007118 GO:0005576
Pste7g00637 278 PRINTS Expansin/Lol pI family signature 54 69 IPR007118 GO:0005576
Pste7g00637 278 PRINTS Expansin/Lol pI family signature 160 176 IPR007118 GO:0005576
Pste7g00637 278 PRINTS Expansin/Lol pI family signature 93 111 IPR007118 GO:0005576
Pste7g00637 278 PRINTS Expansin/Lol pI family signature 219 233 IPR007118 GO:0005576
Pste7g00637 278 Pfam Expansin C-terminal domain 179 261 IPR007117 -
Pste7g00637 278 Gene3D - 173 274 IPR036749 -
Pste7g00637 278 SUPERFAMILY PHL pollen allergen 178 272 IPR036749 -
Pste7g00637 278 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 73 177 IPR007112 -
Pste7g00637 278 SUPERFAMILY Barwin-like endoglucanases 41 176 IPR036908 -
Pste7g00637 278 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 191 273 IPR007117 -
Pste7g00637 278 Pfam Lytic transglycolase 90 167 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00637 Pste-Chr7 5904901 5906811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00637 28 277 Expansin Gene Family AT4G17030 59.363 4.19e-112 322