Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00631 ATGGATCTTGGTTTGAGGCACCAACTTGGCCTTGTCTGTGTCATACTGCTCCTTCCTGCACTGTGTAGCTGCCAGGGATTTACAAAATCCAGAGCAACCTTTTATGGTACCTCTGATGGCTACGGGACTCCAACCGGAGCTTGCGGCTTTGGTGAATTTGGAAGGAGAATGAATTGGTACGATGGAAGAGTGGCAGGGGTGGGTGGGCTGTATAGGAATGGAGCAGGCTGTGGTGCATGTTATCAGGTAAGGTGTCTAATACCAAGATTATGTGATGCAAATGGAGCATACCTGGTGGCAACAGACCAGGGTTACGGAGACAGAACAGACTTTATAATGAGCCCGCGCGCGTTCTTTAAATTGGGACGCAATGCAAAAGCATCTGAGGAGCTTAAAAAATACGGTACATTGGATATTGAATACAAAAGGGTTCCCTGCACATACACGGGCAATGTCTTGTTCCATATCAAGGAAACTAGCAGCAACCCTGGTTACTTCGCTGTGGTCATTCTCAATGTAAATGGTAAAAATGACGTGACTGCTGTTGAACTGTGGCAGAAAACGCAACAACGATGGGAACCACTTCACAGGTCGTATGGGGCAGTGTTTGACTTTGCAAACCCACCCAGTGGTGAACTCCTCTTGAGGTTTAAAGTGGGCCCTATTTGGAAGATATACAAGGTACCTGCTAATTGGAAGCCTCGATTTACTTATGACACCAACCTTCAGCTTTAATGCTTTATCAATGGAAACAAAATTGCCACTTTGGGATCCCAACTGCAAACTACAAATATGCTATAGTACGTTGTATTATTCTGCTTGTTTGTAATTAGTGTCAATGCTTTTTCTTTTTTTGTAAAGGGTCTGGAATAAATGGGGATTCATATATACTTTTCATCTAAGACTACATGGACTATGAATAAGATAAGATTGTTTCATGTTAATATATTTGATATTGAAGCATGTCGCAGATCGGCAAATGATCACTACAG 992 0.4284 MDLGLRHQLGLVCVILLLPALCSCQGFTKSRATFYGTSDGYGTPTGACGFGEFGRRMNWYDGRVAGVGGLYRNGAGCGACYQVRCLIPRLCDANGAYLVATDQGYGDRTDFIMSPRAFFKLGRNAKASEELKKYGTLDIEYKRVPCTYTGNVLFHIKETSSNPGYFAVVILNVNGKNDVTAVELWQKTQQRWEPLHRSYGAVFDFANPPSGELLLRFKVGPIWKIYKVPANWKPRFTYDTNLQL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00631 244 Gene3D - 148 244 IPR036749 -
Pste7g00631 244 SUPERFAMILY PHL pollen allergen 151 239 IPR036749 -
Pste7g00631 244 Pfam Lytic transglycolase 65 133 IPR009009 -
Pste7g00631 244 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Pste7g00631 244 Pfam Expansin C-terminal domain 153 222 IPR007117 -
Pste7g00631 244 PANTHER EXPANSIN-B3 17 243 - -
Pste7g00631 244 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Pste7g00631 244 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Pste7g00631 244 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Pste7g00631 244 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Pste7g00631 244 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Pste7g00631 244 Gene3D - 20 147 IPR036908 -
Pste7g00631 244 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 151 IPR007112 -
Pste7g00631 244 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 240 IPR007117 -
Pste7g00631 244 SUPERFAMILY Barwin-like endoglucanases 13 151 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00631 Pste-Chr7 5857234 5858860 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00631 9 244 Expansin Gene Family AT4G17030 47.541 8.72e-73 220