Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00623 ATGATGGATTCTGTTTTTTCCTTCCAAAATCCACCATCGTCCCAACCCTTGTTGACCCCAAAAGCAGAACCTTTCTGGGACAGCCACGACGACATTTCCGAAGAACTCGACCTGTTAACTGAGTACAACCGCGTCTCGGAGCTGTTCCACTTGGCTTTCGGAGGCAGCAACGTTGTTGTCCCTCCCTTCGGAGCCAACGACGTTGTTGTCCCTCCCTTCGGAGCAAACAATGTTGTTGTCCCTCAATTCGGAGGCAGCAATGTTGTTGTCCCTCCCTCCGACCCGGGTCTCGAAGTGGGTGCTCCGGACTACGAGGAGGTGTCGCGAGCGATCGTGCCGGTGGCGCAGAAGGAAGGGACGGTGGCGGCGCCACGGCGGAGGCTGAGCCGGCAGAAGGAGCTCGTGAGGGTGGCCGATCTGTCAGAGAGGGACGGCGCGCTTTTACGGGAGAGCGTGAGGCGGACGCGCCTGATTTACGACTCCCTCCGAGTGCTGACCGCCGTGGAGGAAGAAAAACGGGCAGCGGCGGCGGCGACGGCGGCGGCATCGGCGGCGTGCCTCCCGGATGAGGGCAAATCACGGCGGCTGCGCGGCGACCTAAGGGCTGCCTCCCTAATGAGAAACCATGGACTGTGGTTAAATCGTGAGAAAAGGATCGTTGGAAGCATCCCTGGAGTCTGGGTTGGTGATTTGTTTCTGTTCAGGATGGAACTGTGTGTGGTGGGATTGCATGGTCAGATTCAAGCTGGCATTGATTATCTCCCTGGAAGCATGAGTGCAACTGGGGAACCTATAGCCACCAGTGTGATTGTTTCTGGTGGGTATGAGGATGACATGGATGATGGTGAGGTTATAGTTTACACTGGCCATGGAGGGCAGGGCAAGAATTCTTCCAGACAGGTTGCTCATCAGAAGTTGGAGCAAGGGAATCTTGCTTTGGAGAGGAGTATGCATTATGGCATTGAGGTTAGGGTTATTCGTGGAATGAGGTATGATGGTAGTGCTTCTGGTTCTGGTAAGGTGTATGTTTATGATGGAGTGTATAGGATTGTTAATTGTTGGTTTGAAGTGGGTAGGTCTGGTTTTGGAGTTTATAAGTTTAAGCTTTGTAGGATTGAGGGGCAGCCTAAGATGGGTAGTGCTGTTTTGAAGGATGCTAGAAATATTAGGAGGTGTCAGTTGAAATCTGATTGTTGTGTTTCTGCTGATATGTCTAACAATAAGGAGAGTGTTTCTGTGAGGCTTGTTAATGATGTGGATGATGATAGGGGTCCTTTGTGTTATGAGTATCTTGCCAGGACTAGTTTCCCGCAGTTTGTGTTTCATCAGAGTGGGAATGTTACTGGGTGTGAGTGTGTGGATGGTTGTGGTGATGGGTGCTTTTGTGCTATGAAAAATGGGGGTGAGTTTCCTTATACACTGCAGGGGCATCTTGTGAGAGGGAAGCCTTTGATTTTTGAATGTGGTCCTTTTTGCAGTTGTCCTCCTCATTGTCGCAATCGTGTTACGCAGAAGGGGCTGAAACATAGGTTGGAAGTGTTCAGGTCGCCGCATACAGCTTGGGGTGTTAGGTCCTTGGACCTTATTCAGGCTGGTGCTTTTATCTGTGAGTATGCTGGGATTGTTTTGACCAGGGAGCAAGCCCAACTCTTGACAGTGAATGGTGACACATTGATATATCCTAACCGGTTTGGGGAAAGATGGGCAGAATGGGGGGATTTGTCTCAGATAAACCCAGATTATGTTCGCCCGTCGTATCCTGCAATCCCTCCTTTAGATTTTTCTCTTGATGTGTCGACAATGAGGAATGCTGCTTGCTACATGAGCCATAGTTCAACTCCAAATGTCATGGTTCAGTTTGTTCTGTATGATCACAACAATTTGATGTTCCCGCACCTTATGCTATTTGCAATGGAAAATATCCCTCCCATGAGAGATCTCAGCCTTGATTATGGTGTAGCTGATGAGTTGACAGGCAAGCTCTCTATATGTAACTGA 1998 0.499 MMDSVFSFQNPPSSQPLLTPKAEPFWDSHDDISEELDLLTEYNRVSELFHLAFGGSNVVVPPFGANDVVVPPFGANNVVVPQFGGSNVVVPPSDPGLEVGAPDYEEVSRAIVPVAQKEGTVAAPRRRLSRQKELVRVADLSERDGALLRESVRRTRLIYDSLRVLTAVEEEKRAAAAATAAASAACLPDEGKSRRLRGDLRAASLMRNHGLWLNREKRIVGSIPGVWVGDLFLFRMELCVVGLHGQIQAGIDYLPGSMSATGEPIATSVIVSGGYEDDMDDGEVIVYTGHGGQGKNSSRQVAHQKLEQGNLALERSMHYGIEVRVIRGMRYDGSASGSGKVYVYDGVYRIVNCWFEVGRSGFGVYKFKLCRIEGQPKMGSAVLKDARNIRRCQLKSDCCVSADMSNNKESVSVRLVNDVDDDRGPLCYEYLARTSFPQFVFHQSGNVTGCECVDGCGDGCFCAMKNGGEFPYTLQGHLVRGKPLIFECGPFCSCPPHCRNRVTQKGLKHRLEVFRSPHTAWGVRSLDLIQAGAFICEYAGIVLTREQAQLLTVNGDTLIYPNRFGERWAEWGDLSQINPDYVRPSYPAIPPLDFSLDVSTMRNAACYMSHSSTPNVMVQFVLYDHNNLMFPHLMLFAMENIPPMRDLSLDYGVADELTGKLSICN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00623 665 SMART preset_2 401 493 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste7g00623 665 SUPERFAMILY PUA domain-like 202 386 IPR015947 -
Pste7g00623 665 Gene3D - 218 380 IPR036987 -
Pste7g00623 665 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 141 653 - -
Pste7g00623 665 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 28 665 IPR025794 GO:0016571
Pste7g00623 665 ProSiteProfiles SET domain profile. 509 652 IPR001214 GO:0005515
Pste7g00623 665 Pfam Pre-SET motif 405 501 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste7g00623 665 Pfam SAD/SRA domain 220 375 IPR003105 -
Pste7g00623 665 Pfam SET domain 521 652 IPR001214 GO:0005515
Pste7g00623 665 Gene3D SET domain 381 665 IPR046341 -
Pste7g00623 665 SMART set_7 509 658 IPR001214 GO:0005515
Pste7g00623 665 SUPERFAMILY SET domain 411 655 IPR046341 -
Pste7g00623 665 ProSiteProfiles YDG domain profile. 221 371 IPR003105 -
Pste7g00623 665 ProSiteProfiles Pre-SET domain profile. 448 506 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pste7g00623 665 SMART G9a_1 216 375 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00623 Pste-Chr7 5800395 5802392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00623 115 654 Su(var)3-9 homologs AT5G04940 36.918 2.37e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste7g00623 SAD_SRA 8.6e-48 CL0178