Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00614 ATGATGGCACATGGAACAGGAGCAGACTGCTTCCTCCAAATGGTTTCAGAATCAGAGGCAGTTATGTCTGCCACACAAACCTTTGGTAGTGTTGAAAATTTAGCCTACTCCTATTCCAGTGGAGAAGATGCAAATGCAATTAATAGAGGTGCAATGGAACATCCCCAACAAAATTCATACAATTATAGCAATAGCTTCAACACCCATCAATATGGCTCATGTGATCATGAGGAGCTTCATTCCTTCCCCCACTTCACCACCACACACCAATTTTCTTACCCCACACCAACACCAACCATTATTGTTCCAACAAAACCTATGGGATACAGCACAAATAATAATAATAATAATGTTTCTTCTGTTTCCTATGACCCTTTCTTGCATCTGAACCTGCAAGCACCTCCTGAGCTGAGAAATGATATTATTGCCTTTGGTGAAACACAAACCTTTCAAGATTTTGAGAATGAAACTCAAGATTTTCGTAAAAGGAGAGGGAGAAAAAGGACCCAGCAGGAGTTCACCAGCACTACTACTGAGAGACAAAGGAGAGTGGATTTGAGTGGTAAATTTGATGCTTTGAAAGAACTCATTCCAAACCCCTCCAAGAGAACTTTAAACAGTAAAATTTTTCCACCCTTTTCTTCTCTTATGTATATAACTTTTGTAAGTAAACTGTGGCTGATTTTCTTTCCTTATGAAAACAAGAGTGATAGAGCATCTGTAGTGGGAGATGCAATCAACTATATCAGAGAGCTTAAAGGGACACTGGAGGATCTCAAATTACTGGTGGAGAGGAAAAGGCACGAGAAACATAGGATGATGAGGCACAAGGTGGAAGCTGAAGGAGACTCCAGGGAGGGCCAAGAATACAGTGAAAGCTTGAGAAGTTCATGGGTTCAAAGAAAATCCAAGGACACTGAAGTTGATGTGCGCATTGTTGACAATGAAGTAACAATTAAGGTTGTTCAGAGGAACAAGGTTGATTGTTTGGTGCATGTCTCACACGTTCTGGATCAACTTAACCTCGATCTCCAACACGTTTCTGGTGGTCACATTGGCAATTTCTGCAGCTATCTCTTCAATACCAAGATATATGAAGGTTCCTCTATTTATGCAAGTGCTATAGCCAACAAGCTCATTCAGGTCTTGGATTCAAGTTTGACGGCTGTGTCACTCACTTAA 1182 0.4078 MMAHGTGADCFLQMVSESEAVMSATQTFGSVENLAYSYSSGEDANAINRGAMEHPQQNSYNYSNSFNTHQYGSCDHEELHSFPHFTTTHQFSYPTPTPTIIVPTKPMGYSTNNNNNNVSSVSYDPFLHLNLQAPPELRNDIIAFGETQTFQDFENETQDFRKRRGRKRTQQEFTSTTTERQRRVDLSGKFDALKELIPNPSKRTLNSKIFPPFSSLMYITFVSKLWLIFFPYENKSDRASVVGDAINYIRELKGTLEDLKLLVERKRHEKHRMMRHKVEAEGDSREGQEYSESLRSSWVQRKSKDTEVDVRIVDNEVTIKVVQRNKVDCLVHVSHVLDQLNLDLQHVSGGHIGNFCSYLFNTKIYEGSSIYASAIANKLIQVLDSSLTAVSLT 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00614 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 271 IPR036638 GO:0046983
Pste7g00614 393 PANTHER TRANSCRIPTION FACTOR BHLH91 40 203 IPR045895 GO:0006355|GO:0048658
Pste7g00614 393 SMART finulus 176 258 IPR011598 GO:0046983
Pste7g00614 393 MobiDBLite consensus disorder prediction 157 181 - -
Pste7g00614 393 Coils Coil 249 269 - -
Pste7g00614 393 Gene3D - 158 281 IPR036638 GO:0046983
Pste7g00614 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 252 IPR011598 GO:0046983
Pste7g00614 393 Pfam Helix-loop-helix DNA-binding domain 178 252 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00614 Pste-Chr7 5727141 5729399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00614 85 389 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 37.950 7.84e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00614 HLH 3.3e-06 No_clan