Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00612 CCACAAGTCACCTCACTACTGTTTTACAAATGTTCATATTCCATATTCCGTTTCTCACTTTTTCACATATAAAAAATACACTACTTCTTTTCATGAGGTAACATCCCAGCAAGCTCAGCCACTCAGTTCTGCTCCTACAACACTACTTTTCCTTCTCCTACGCCTCTCTTTTTATTCCCATTATATTTCTTTTTTGTATTTTTTCCTTGCCTTGCCCACGCTAGCTACTTTATATTAAATTTAATTGGCCCCCTTAAATTTATTATTTTTATACTTAGAGTTGTAAGTATAAGTTGGGGTCCCCTCTCTCTAACTGGGTGTAGCTTTTGGGAGGGTTGACATGGAAGAACGGTATGAGCCATTGAAGCAGCTTGGTTCTGGGAATTTTGGTGTCGCCAGGTTGGCCAAAGACAAGAACACAGGAGACCTTGTTGCGGTCAAATACATAGAGAGGGGCAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATCAACCACAGATCTTTGAGGCATCCAAACATAATCAGGTTCAAAGAGGTCTTGCTGACCCATACACATTTAGCTATCGTCTTGGAGTATGCTTCAGGTGGTGAACTTTTTGAGAGGATATGTAATGCTGGACGATTTAGCGAAGATGAGGTGGTAGAATCTATAGTGTGTGAATTAATTTCTATATTGCAGGCAAGATATTTCTTCCAGCAGCTAATATCTGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCACAGAGATCTGAAATTGGAAAACACTCTTTTGGATGGAAATCCATATCCTAGGCTAAAAATCTGTGACTTCGGTTACTCCAAGTCTGCACTTCTGCACTCGCAACCTAAATCAACAGTTGGAACTCCAGCATACATTGCTCCAGAGGTTCTGTCACGAAAGGAGTATGATGGAAAGATTTCAGATGTCTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTCGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATAGGGAGAATAATAGGTGTTCAGTACTCCATACCCGACTATGTTCGTGTTTCTTCTGAGTGTAGGAATCTTCTCTCTCGCATCTTTGTTGCCGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAGCAGAATCCTTGGTTTCTGAAGAATTTGCCTAAAGAGATTATTGAAGCTGAAAGAAAAGGATTCGAGGAAACAAAGAAAGACCAACCAAGCCAGAAGGTGGAAGAAATAATGAGGATCATACAAGAGGCAAGGACACCAGGACAAGGATCCAAAGCTGGTGATAGTGGGCAAACTGGCACTGGATCATTAGATATTGGGGATGATGAAGAAATTGATGTTAGTGGAGACTTTGAACATGTGTGATGGAGACCTTAATCAGTTGAAGGCTAGATTGTCTAAAAGACATAGTCAACATTATTGACATTTATTACACTGTGCAACAATGGTGTTCTTAAGATACCTATCATACCAGGCTTGAAATAGGTTTTTGTGTTTATTTAAATGAATAATATTAAGAAAAGGGTGGTAATTTTTTTATTTTTAATTCCAGTAAATTCAAAATTTAAATACTTTGTACAGAACTTCATAAAATTTGTTGCATAACTATTAAATAATTTTGGTAAATGG 1657 0.3856 MEERYEPLKQLGSGNFGVARLAKDKNTGDLVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTHTHLAIVLEYASGGELFERICNAGRFSEDEVVESIVCELISILQARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPYPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSSECRNLLSRIFVADPAKRITIPEIKQNPWFLKNLPKEIIEAERKGFEETKKDQPSQKVEEIMRIIQEARTPGQGSKAGDSGQTGTGSLDIGDDEEIDVSGDFEHV 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00612 350 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pste7g00612 350 MobiDBLite consensus disorder prediction 318 332 - -
Pste7g00612 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Pste7g00612 350 PANTHER SERINE/THREONINE KINASE 3 298 - -
Pste7g00612 350 CDD STKc_SnRK2 4 274 - -
Pste7g00612 350 FunFam Serine/threonine-protein kinase SRK2E 81 283 - -
Pste7g00612 350 Pfam Protein kinase domain 5 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00612 350 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Pste7g00612 350 SMART serkin_6 5 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00612 350 Gene3D Transferase(Phosphotransferase) domain 1 81 282 - -
Pste7g00612 350 ProSiteProfiles Protein kinase domain profile. 5 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00612 350 SUPERFAMILY Protein kinase-like (PK-like) 3 283 IPR011009 -
Pste7g00612 350 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Pste7g00612 350 MobiDBLite consensus disorder prediction 311 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00612 Pste-Chr7 5713421 5717255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00612 4 293 CBL-interacting serine-threonine protein kinases AT4G24400 40.134 2.38e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pste7g00612 Pkinase 2.2e-68 CL0016