Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00602 ATGAGCCTTGCAATAGGCACACCACTTTGGCGTAATGGGCCACCTGAGAAGCCAGTACTATGCAATGCATGTGGATCTCGATGGAGGACAAAGGGAACACTTGCAAATTATACCCCTTTGCATGCTCGGGCAGAAAATGTTGATTGTGAGGATCAAAAGGTTTCCAGGGTTAAGAGCATATCATTAAATAAGAACAAAGAAGTGAAATTGGTCAAACGAAAGCAGAACTATGATAATGCTGCATCTGGAGGGTTTGTCCCAGATTATAATCAAGGATACCGAAAGTTTGTGGATGAAGATACAAGCAATAGATCAAGCTCAGGGTCAGCTGTCTCGAACTCAGAGAGCTGTGCCCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGTGCAGGTCGTCCAAAGCCTTCATCTGTTGAGAAGCTCACACGGGACCTGTGTACTATTCTTCATGAACAGCAGTCTTATTTTTCGGCTTCTTCGGAAGAAGATCTTCTTTTCGAAAGTGATACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCAGCTCGGGATGAAGAGTCTGAGGCTAGCTCTCTCTCAATTGATAATAAGCAAAGCCTAATGAATGAAGCATATTCATTTTCTAGTACCATTCCTATGCATAGTGATCGCAGTGGCATGAGCTTCTCATCTGTTGGAGTTGGAAAGATAAAAAACTCAACTGGCCAAACCATGCAACAAGTGCAATTTGAAAGGGAAAAGTCTCAGCTTGAAAAACTACAAGCTCCTGGAAATCATGATTCACCGCTGTGCTCAATAGATTTAAATGATGTAGTGAACTATGAGCAGTTTATGAGAAACTTGACACAGGAAGAGCAGCAGAAATTACTGAAGTATCTGCCTGTGGTTGATGCTGCTAAATTTCCTGATAGCCTTAAAAACATGTTCAATAGCTTCCAATTCAAGGAGAACTTCACCTACTTTCAGCAACTTCTTGGGGAAGGTGTCTTTGACATCTCTTCTTCAGGGACAAAACCTGAAGAATGGAAGACATTGAAAAGGCTTGTGTTATCTAATCAGTCAAAGTCAAAATGGGTAGAACACTATAATTTTCTCAAGAAATGTGAAAAGAAAACTGGAAAATCTAGTGTTGTGGGATCTACGGCTATGGAATCAAGTAATGTTATAAATGCGAAGAGAATGCGTGAGCATGACAGCCAAAATACAAATTTTTCAGAATTGAAGACAACGATGAGGAGCCCCAAAAGGGTGATCATAAAGCCTAGCTATGAGGGCAAAGAAGTTGTAGAAGAAGGCTCTAGCTTCAGTCCAAAAAGCTTATTTGCTTTACCCCAAGGTGTTGGTGGATTGCACATGCTGGATTCATTTAACTTTGTTGATGAGAGTTCTGAGGATCTGCTGTTAGAGGTGCCTTCTAACAGTTCTTTTCCACAGGCAGAGCTCCTGCACCCAACTTTAAGCTATGGGGCTCAGGTCAGCACCACTAGTAGCTCAGCTCACTCACCTGTTCTCCATCCTTAACAAATCTTTACTAGGTTGTTTGGATGGGTATGGACAAAAATATTCAGTCATAATAGTGTCCACATGTTTTGCATATGAAACACCAAAATTCCTGTACAAGAGATGTATGGTTGTGTTTTTGTTTCCTTGCAACCTTGAGCTTGGATTGCCAAAGGATGGAAATTGAATGGGCTTTTTTTGTATAGGTTGGTAATATTGTACATATAGCATGAAATGCGGAGTGGCTGTCTCCGGAATTTTGTATGCAATTGTAGTTTATGTTTTGTGAATGATTTTTACACTTTTCTTTTTTATTTCTCAAGTAGGTTTAAATCATAACTCTCCAAACTTATATCTAAAGAAGATGACACAAGCTTTTCGGTTTGGATTAGAAAGAACTGGACTGTCATTCGTCTTAAGTACTTCCAAAGCATGTGACACCCCATGTATTGACATTTTAGAGGTACTTTGACTAAAGTCGCTATATTGATTCCTATGTCTACTAGTTACATGTCACAATGAAATATGTGGATCACACTGACAATGTTGTTAGAATTGGTTAAAGATCAAATTCTAAAGATATTATTTT 2170 0.4009 MSLAIGTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAENVDCEDQKVSRVKSISLNKNKEVKLVKRKQNYDNAASGGFVPDYNQGYRKFVDEDTSNRSSSGSAVSNSESCAQFGGTDASDLTGPAQSVVWDAMVPSKKRTCAGRPKPSSVEKLTRDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSILIRHPSSARDEESEASSLSIDNKQSLMNEAYSFSSTIPMHSDRSGMSFSSVGVGKIKNSTGQTMQQVQFEREKSQLEKLQAPGNHDSPLCSIDLNDVVNYEQFMRNLTQEEQQKLLKYLPVVDAAKFPDSLKNMFNSFQFKENFTYFQQLLGEGVFDISSSGTKPEEWKTLKRLVLSNQSKSKWVEHYNFLKKCEKKTGKSSVVGSTAMESSNVINAKRMREHDSQNTNFSELKTTMRSPKRVIIKPSYEGKEVVEEGSSFSPKSLFALPQGVGGLHMLDSFNFVDESSEDLLLEVPSNSSFPQAELLHPTLSYGAQVSTTSSSAHSPVLHP 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00602 533 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 286 398 IPR044867 -
Pste7g00602 533 Pfam Asx homology domain 284 366 IPR028020 -
Pste7g00602 533 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 37 - -
Pste7g00602 533 Gene3D - 3 78 IPR013088 GO:0006355|GO:0008270
Pste7g00602 533 CDD ZnF_GATA 7 47 IPR000679 GO:0006355|GO:0043565
Pste7g00602 533 PANTHER OSJNBB0038F03.10 PROTEIN 6 516 IPR044589 -
Pste7g00602 533 Pfam GATA zinc finger 6 33 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00602 Pste-Chr7 5630856 5635416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00602 7 510 C2C2-Gata Transcription Factor Family AT4G17570 53.167 1.02e-148 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pste7g00602 ASXH 7.4e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01233 1 3936216 3942657 Pste7g00602 7 5630856 5635416 PCT