Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00600 AAAGTTAAAAGGAACTTCTTAACTTCTCTCCCACCTCAATTGTCACTACTATCGTCACCACCAAAACAGTACAAATCTATCACTTTCTTTAGCCATGCCAGAAAACTGCATAGCACCCAAATCAGAACACAACAACAGTTATCCTGAGGAAGGACCACCTGAGATGACTGAGGCTGTCCTTCCCATACAAAGAAATGACCAATCTTTTCCAAAACTGGCTATGTACCCCATAATTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAAATAGAACAGAGGGGTATATTTTGGGGGGGCACAAAGAGTTGTAAGGAGAAGACAATACTGAAAGGAGTCACAGGCATGGTTTGTCCTGGAGAAATGATGGCTATGTTGGGGCCTTCTGGCAGTGGCAAAACCACACTTCTCACAGCACTTGGAGGAAGGCTTAGTGGCAAACTATCTGGAAAGGTCACATACAACAATCAGCCTTTTTCAGGTTCCATGAAAAGAAAAACAGGTTTTGTGGCACAGGATGATGTGCTCTATCCTCATCTCACTGTATTTGAAACTCTTCTCTTCACTGCACTTCTGAGGCTCCCCAACAGCTTGACTAAGGAAGAGAAAGTTCAGCATGTTGAGCATGTTATCAGTGAGCTAGGACTGAATAAGTGTAGGAGTAGCATGATTGGAGGGCCACTTTTCAGAGGGATATCAGGTGGGGAGAAAAAGAGGGTGAGCATAGGCCAAGAAATGCTAATCAATCCAAGCTTGTTGCTTTTGGACGAACCAACTTCAGGGTTGGATTCTACAACAGCACAAAGGATCATAAACACAATCAAACGCTTGGCTAGTGGAGGAAGAACTGTTGTCACCACCATTCATCAACCCTCTAGTCGACTTTATCACATGTTTGATAAAGTAGTCTTGCTCTCTGAAGGATGTCCTATCTATTATGGACCTGCTTCAACTACAATGGACTACTTTTCTTCTGTTGGCTTTTCCACTTCTATGATTGTCAATCCAGCTGATTTAATGCTTGACCTTGCCAATGGAATTGCTCCGGACTCCTCCAAGCATGCAACTGAACAAAGTGAGAGCCACGAGGCAGAAAAGAAGTTGGTGAGGGAAGCATTAATCACTGCTTATGAAAAGAACATAGCTACTAAGCTCAAACATGAGCTATGTAGCTTGGAGGTGAATAACTACAAAGTCATTAAGGATGCTTCCACAAGAAATCACATGAAACCAGAACAGTGGTGCACAAGTTGGTGGCATCAGTTCAAAGTGCTATTGCAAAGGGGGCTGAGGGAGAGAAGGTTTGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCATAAGTGTCGCTTTCCTTGGTGGACTCCTGTGGTGGCACACCCCAGAATCTCACATTGGAGATAGGAGAAGAATGCTGATAAAGGAACGTTCATCAGGAATGTACCGTCTTTCTTCCTACTTTCTAGCAAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTTCCAACAGCCTTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAGCCTAATCCAGTGATCTTTCTCCTTTCCCTCCTTGTGGTCCTCTACAGTGTCCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCCATTTTGATGGAGGTCAAACAGGCCACAACTTTAGCTTCTGTGACAACCCTTGTGTTCCTCATTGCTGGAGGGTACTACATACAACAGATTCCTCCTTTCATTGAATGGCTCAAGTATGTGAGCTATAGCTACTACTGTTACAAGCTTCTTGTTGGTGTTCAGTACAATGATGGTGATTACTATGAGTGCTCAAAAGGAGCCTTGTGCAAAGTTGGAGAATTTCCTCCAATAAAATCTGTGGGTTTGAATCACTTGTGGGTTGATGTGTCTATTATGGCCATGATGTTGATAGGTTACAGACTAGTAGCTTACTTAGCACTACAGAGAGTGAGG 1966 0.4323 MPENCIAPKSEHNNSYPEEGPPEMTEAVLPIQRNDQSFPKLAMYPIILKFEELVYKVKIEQRGIFWGGTKSCKEKTILKGVTGMVCPGEMMAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGSMKRKTGFVAQDDVLYPHLTVFETLLFTALLRLPNSLTKEEKVQHVEHVISELGLNKCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIINTIKRLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTTMDYFSSVGFSTSMIVNPADLMLDLANGIAPDSSKHATEQSESHEAEKKLVREALITAYEKNIATKLKHELCSLEVNNYKVIKDASTRNHMKPEQWCTSWWHQFKVLLQRGLRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRRRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVFIIYWMGGLKPNPVIFLLSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYVSYSYYCYKLLVGVQYNDGDYYECSKGALCKVGEFPPIKSVGLNHLWVDVSIMAMMLIGYRLVAYLALQRVR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00600 624 Pfam ABC-2 type transporter 257 326 IPR043926 GO:0140359
Pste7g00600 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 433 - -
Pste7g00600 624 FunFam ABC transporter G family member 22 66 294 - -
Pste7g00600 624 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524|GO:0016887
Pste7g00600 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 300 IPR003439 GO:0005524
Pste7g00600 624 Pfam ABC transporter 78 228 IPR003439 GO:0005524
Pste7g00600 624 SMART AAA_5 87 277 IPR003593 GO:0016887
Pste7g00600 624 Pfam ABC-2 type transporter 436 568 IPR013525 GO:0016020|GO:0140359
Pste7g00600 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 293 IPR027417 -
Pste7g00600 624 MobiDBLite consensus disorder prediction 1 23 - -
Pste7g00600 624 Gene3D - 66 294 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00600 Pste-Chr7 5623540 5626802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00600 77 276 Calmodulin-binding Proteins AT2G36910 29.126 7.24e-12 67.0