Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00579 ATGTCAAGTGCAAGATTGTCTTTTTGGGATCATCTGGACTCTTCTATGGATGGATTTGAGGTTTTGAGGAATGAATCCCTTGATTTTGCAGCAGATATATGGTTTTTAGGGTATATTGTTATTGAGATGACCATTGACACCCCTCCTTGGGCTCATCGTGTCTTTCCAAATCCTATATCCGTTTTGCTCTCTATTGCCCATGGTGATGCCTTACCTCATTTTCCACCTCATTTCTCTAATGACGGTTTGAATTTCTTGAGAAGATGCTTGCACAAACAACCCAACAAGAGGTTTACTGCTCACCAGTTACTTTCCCATCCTTTTGTTTCTTCTCAGACTTCCTCACCTCCTAATGTATTCTAG 363 0.4077 MSSARLSFWDHLDSSMDGFEVLRNESLDFAADIWFLGYIVIEMTIDTPPWAHRVFPNPISVLLSIAHGDALPHFPPHFSNDGLNFLRRCLHKQPNKRFTAHQLLSHPFVSSQTSSPPNVF 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00579 120 Gene3D Transferase(Phosphotransferase) domain 1 19 118 - -
Pste7g00579 120 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 20 111 - -
Pste7g00579 120 SUPERFAMILY Protein kinase-like (PK-like) 20 111 IPR011009 -
Pste7g00579 120 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00579 120 Pfam Protein kinase domain 20 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00579 Pste-Chr7 5399461 5399901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00579 20 112 MAP Kinase Kinase Kinase AT1G05100 37.634 1.38e-19 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pste7g00579 Pkinase 1.1e-12 CL0016