Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00572 ATGGCCAACGAAGCAGAAGTTTCAGCCCTGAACCGCATCAAACTGCATCTTTTAGGGGAACTCTCTCCACTGCCCACTCCCCAGAGCAAACAACAACAAACAAGCTTCGAATCGGGTGAAACAAACCCTAGTCTCTCTTCTGACTCTTCTATGTCGCTCAACCACTACTTCACTGAAGTTATCGAACCCGAATTTCAATTTCCCCTCTTCCAATTCGACTCCAAACCCCAAATAATCGACCTTCAAACCCCAAAACCACTTCAATCTGAAGCTGTGGAGAAGAAGCCTCCAATGAATCGAAAACCGTCGCTGCAGATTTCCCTCCCCAAGAAAACCGAGTGGATCCAATTCGGGAACCCGGATCCCAAACCCGAAGTGGTCGCGCCGGAGAAGAAACACTACAGAGGCGTCAGGCAGAGGCCCTGGGGCAAGTTCGCTGCTGAGATCCGAGACCCAAACAAGCGCGGGTCAAGAGTATGGCTCGGGACCTTTGACACCGCCATCGAAGCCGCCAAGGCATACGACCAAGCCGCCTTCAAACTCCGCGGCTCCAAGGCTATCCTCAACTTCCCCCTCGAAATTGGCACTGCGGCGGAGAGCGACGGCGATAGAAAGCGCCGCCGCCAAGAGGATGTGGTGGAGGAAGTGAAGCCGGTGGTGAAGAAGGAGAAAACGACGGAAGCCGACGTCAACTGTTTTAGGGAGATGCCGTTAACGCCGTCTATGTTGACCGGGTTCTGGGATAGTGACGTTAAGGATATTTTCAACGTTCCACCGCTGTCGCCGTTATCTCCTCTTCCTGCTTTTGGATTTTCACAGCTAATGGTTGTCTGA 834 0.5264 MANEAEVSALNRIKLHLLGELSPLPTPQSKQQQTSFESGETNPSLSSDSSMSLNHYFTEVIEPEFQFPLFQFDSKPQIIDLQTPKPLQSEAVEKKPPMNRKPSLQISLPKKTEWIQFGNPDPKPEVVAPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDQAAFKLRGSKAILNFPLEIGTAAESDGDRKRRRQEDVVEEVKPVVKKEKTTEADVNCFREMPLTPSMLTGFWDSDVKDIFNVPPLSPLSPLPAFGFSQLMVV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00572 277 Gene3D AP2/ERF domain 132 193 IPR036955 GO:0003700|GO:0006355
Pste7g00572 277 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700|GO:0006355
Pste7g00572 277 CDD AP2 132 191 IPR001471 GO:0003700|GO:0006355
Pste7g00572 277 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677
Pste7g00572 277 PANTHER DNA-BINDING DOMAIN 96 208 IPR044808 GO:0003700|GO:0009873
Pste7g00572 277 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Pste7g00572 277 PRINTS Ethylene responsive element binding protein signature 173 193 IPR001471 GO:0003700|GO:0006355
Pste7g00572 277 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Pste7g00572 277 MobiDBLite consensus disorder prediction 24 50 - -
Pste7g00572 277 MobiDBLite consensus disorder prediction 21 50 - -
Pste7g00572 277 SMART rav1_2 133 197 IPR001471 GO:0003700|GO:0006355
Pste7g00572 277 FunFam Ethylene-responsive transcription factor 2 132 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00572 Pste-Chr7 5280232 5281065 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00572 1 277 AP2-EREBP Transcription Factor Family AT5G47230 49.505 1.10e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g00572 AP2 1.6e-16 CL0081