Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00541 CCACGACAAGATAAATGGATAGTGTTGTGTTGTTAGGCGTCTCTCTTTCCTCCCATCTGCGAAAGCCGAGGGAGACCGAAGCAACAAAAACATCATAACCAACACCTATTCCTTCCTTCCTTCCTTCGGTAACCTTAAACCCCCGAATTTCATGTATCGGATCCCGTGATTCGGATCCCCAAGACCCGCTTCCACAACCTTCTGGTGCCCTTTTGGTGGATCCGCTTCCCAACGCCATGACCCGGCGTTGCTCGCATTGCAGCCACAATGGACACAACTCTAGGACTTGCCCCAATCGAGGGGTTAAGCTCTTCGGAGTCCGATTAACTGACGGCTCCATCCGGAAGAGTGCTAGCATGGGTAATCTCACCCACTATGCAGGCTCCGGCTCCGGCTCCGGCTCCGGACCCCTCCTTGCCGGCTCCAATAACCCGCCTTCTCCCGGGGACACTCCCGATCACGCCGCCGCCGCCGCCGGTTACGCCTCCGAGGACTTTGTTCCTGGCTCTTCTTCCACTTCGCGTGAAAGAAAGAAGGGTGTTCCATGGACTGAGGAGGAGCATAGAATGTTTTTACTTGGATTGCAGAAGCTGGGCAAAGGTGATTGGCGTGGAATTGCAAGGAACTATGTTATATCAAGGACACCAACTCAAGTGGCCAGTCATGCTCAGAAATATTTCATCAGGCAAAGCAATGTGTCCAGGCGGAAAAGGCGGTCCAGCTTGTTTGATATTGTTGCAGATGAAGCAGCGGACACTCCAATGGTACAGCAAGACTTCTTGTCTACTAATCAGTTACCGGCTGAAATAGAAGGCAATAACCCCTTGCCTGCTCCTCCTCCCCTTGATGAAGAGTGTGAATCGATGGACTCTACAAACTCAAATGATGGAGAGCCTGCCCCATCAAAGCCTGAAAACACACAATCATCTTACCCAGTGCTATATCCTGCCTATTACTCTCCAGTGTTCCCATTTCCTCTGCCCTATTGGTCAGGATACAGCCCTGCTGAGCCCACAAAGAAGGAGACACATGAAGTGCTGAAGCCAACTGCAGTACATTCTAAAAGCCCAATCAATGTTGATGAACTGGTTGGCATATCGAAACTGAGTTTGGGGGACTCTATTGGTGACTCTGCCCCCTCCTCTCTGTCTCTAAAACTTCTTGAAGAGGGACCTTCTAGACAGTCAGCTTTTCATGCAACACCGGCGTGTGGCAGTTCAAATATGAATGACAATGCCATCCATGCAGTTTAAGTGTGTGCCTCGGCTAGGAAGGGATTGTTATGTGGGCATCATCGATCAATGCGTGGCTCATGTATGTGGTCTTGTGTTCATCATACATCTGTTTGTGGGGTAACCTAAATAATTTTTGCTTTGCCCATTTACAGTGATTAACCTATTTTGTTTATTTGCTGGTAGGCAGTAGCGTCTAGGAGTTACTTTGGGTCTGAACTCAAACTTATGTTTGTTCAGTGATTTTATTTGTCAGGGTTATGTAAAGTTAATGTCGATTGTGCAGTTTGACAATCTACCTAGTACCTAGTTGTGCTTCGTGTTTTAAGTGCTGGATTAGAATGTTTTAAGTGCTTTACCTGCTCAAACCCGGGTCTCCTGAATTAACCGGGTGAGACAGGAAATCAAGAGCACAACACTGTACCTTCTTGCTAGGATTTGAAAAGTGTTGAGATAGGTTAAACTTTGAATAAGCTTACTTATTCCTTAAATCTAGTTGTGCTTCGTGTTTTAAGTGCTGGATTAGAATGTTTTAAGTGCTTTACCTGCTCAAACCCGGGTCTCCTGAATTAACCGGGTGAGACAGGAAATCAAGAGCACAACACTGTACCTTCTTGCTAGGATTTGAAAAGTGTTGAGATAGGTTAAACTTTGAATAAGCTTACTTATTCCTTAAATCTGATGTAGTGCATGTGTCTT 1931 0.4666 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGSGSGPLLAGSNNPPSPGDTPDHAAAAAGYASEDFVPGSSSTSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADTPMVQQDFLSTNQLPAEIEGNNPLPAPPPLDEECESMDSTNSNDGEPAPSKPENTQSSYPVLYPAYYSPVFPFPLPYWSGYSPAEPTKKETHEVLKPTAVHSKSPINVDELVGISKLSLGDSIGDSAPSSLSLKLLEEGPSRQSAFHATPACGSSNMNDNAIHAV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00541 338 MobiDBLite consensus disorder prediction 46 70 - -
Pste7g00541 338 MobiDBLite consensus disorder prediction 189 229 - -
Pste7g00541 338 Gene3D - 102 154 - -
Pste7g00541 338 MobiDBLite consensus disorder prediction 85 104 - -
Pste7g00541 338 NCBIfam myb-like DNA-binding domain, SHAQKYF class 99 151 IPR006447 GO:0003677
Pste7g00541 338 ProSiteProfiles Myb-like domain profile. 96 148 IPR001005 -
Pste7g00541 338 Pfam Myb-like DNA-binding domain 103 148 IPR001005 -
Pste7g00541 338 MobiDBLite consensus disorder prediction 213 229 - -
Pste7g00541 338 MobiDBLite consensus disorder prediction 1 21 - -
Pste7g00541 338 ProSiteProfiles SANT domain profile. 104 152 IPR017884 -
Pste7g00541 338 CDD SANT 103 148 IPR001005 -
Pste7g00541 338 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
Pste7g00541 338 PANTHER TRANSCRIPTION FACTOR KUA1 3 276 - -
Pste7g00541 338 FunFam transcription factor MYB1R1 102 153 - -
Pste7g00541 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 152 IPR017930 -
Pste7g00541 338 SMART sant 100 150 IPR001005 -
Pste7g00541 338 MobiDBLite consensus disorder prediction 46 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00541 Pste-Chr7 5047893 5053458 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste7g00541 Myb_DNA-binding 1.2e-10 CL0123