Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00540 CCGTTTGATAAGTAAACCCACTTTCTTAGAAATAAAGGCTCATCCTCTCTTTCTCTTCCCACTGCAACAAGTGAGTTGCTTTGTCCCATTCACCCAGCTACTTCTCCTCCATCACCACCTAAAATGCAACCTCTACCACTTCATTTTCTTGGACCCTTTTTCTCTTCAATCCTACATTGTGTCAGATACCAATGCAAGAGTAGTTTTGTCTCTGTATAGATCTGACCCATGTGGGAATATCAAAGAAAGAAGGGATTTTGATTTCTGGGTTTTGGTTTTTGGTGTATTGGGTCATTGGAAAAGTGGAGACATTGTTGTTGGGTCATGGGTTCAAATGGTAGCAAAGCTTCTTCTTCCTCTTGCAGTTCTTCATCGTCTTCTTCAGGGAGCTTGAGGAAGGCTCGATCTAAAAGCCTTAAAGTTTTTCAATCTTTTTGTCTTGGAACAAGTTCTGGCTCTCACGACAGTGATAATGAAGACCAGGACATTGGGATTGTGAAATGGGGGTTGCTAGTTGCTACTAGTATCATGCAACCAAGGATTCTGTTCAGTGTCAGATGGATTGGATTTAGAAGAATCGTCGTTTTGAAACTTTCATGCATTTTATCTGTTTGTGATCAGAATAAAGTAAATGGCAGTGATGTTACATATGCTGATGCTAATGGAACAAACTCAGATGAGGTGAAAGAAGAGTCATTTAGAAAGGTTAAAACTGATGAAATGACTTGTATGCCTTCTAACACTTCATCCAGAAATGATAGCAGTTCTATCGATTCTTCTTCAACTCATTCCTTGAACCCTACTAGTCATTTCCTTTCTCAGTTTAGCCTCATTCCTAGTAATGTAAGCTTCAGACTTAGCAGAACCACCAGTTTGGGGTCATCAAGGCCTTGTCCTGTTTCTTCTGCAAGTCTCTCAATATCTGACAATGAAGAAGAGCACAATCTCCATCCTGGATCTTCTGGAAGTTTGATTAACAGAAGTGAAACACAACAATCTAGTAACTTGCTTCCTGAATCTTTTTTCAATAAAATAAATGCACAGTGTCATGAGGAGGCTTCTAATAATTCAAGGTCAAATGTCCCGACATCAGCTGTACTTGGAAGAAACTTGCATAGTGATCCCACAGATGGAGTTCGTACAAGAGAAGGACCAGATGTGAACTTATTTTCTCCGAGAAATCAAACGGAGACAGAAAATGTTGACACTAGACGTATTGATCGACGGAATGGTGCTCAAGAACCAGTGGAACAGAATGTTCGTTTTAGCCGAACTTTAAGTGTTGGTAGGCTTCGTGACAGAGTTGTTCGTCGATCGACATTATCTGATCTCGCCCTTCTCCCTTTGCAACAAGAGAGAGAGCAGCTGAGAGATGTTAACCTGCCTAGTCAGGATACTGACAGGCAAGCAATGGACGGAGATTCAAGAGTGTTACCATCTGATCATAGTACTATTTATTCTTCAACAGCTAGATATACTCCATCTAGTATGTCTAACTCCATGTTTAGCATCCAAGACTATGAGGTTGAGACTTCACAATTGAGAGAAGGTAGGTATCAGGATCTACTGGAGCATAGGTCCAATTTCCTTGAGCGAAGGAGGAGAATACGGTCCCAGGTTCGTGCTCTTCAACGGTTAGGTAGCCGGTTTGAAAATCTTTCTGGACATGATAGATCGTGTATCTTGTCTGGTCAACATAGAAATGGTCGTTGCACATGCCGTAATCATGACACTAATTCAAATAATGATACTGGTGCTAGAGCTAGCATATCAAGAATTGTTATGCTTGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTTGTTTTATCTCGCCCTTCTGTATCTTCTATTGGATCTGTTCCTGCACCTAATGATGTTGTTGATTCCTTGCCTGTCAAGTTATATGAGAAGTTGCATAAGCATCAAGAGGATGCAGCACAATGCTATATATGCCTCGTGGAGTATGAGGATGGAGACAACATGCGAGTACTGCCGTGCCATCATGAATTTCATAGAACATGTATAGACAAGTGGCTGAAGGAGATTCACAGGGTATGCCCACTTTGTCGAGGGGACATATGCATATCTGATTCAACGCCAACAGAGAACTCGAGTGGCTAGTTGTTGATGAATATCTTCTTTGAAGCATCCACTGTCACTTGACTTTTCTACTGTCAATATCAGAACTTCACTACTTTTTCTACTGTCATTAATGATTATTTTTACACTTATTGTTGAATAAACACCAAATCCATGGTAGAGGTAAAATGTTCAGCTTAAGGGCAAGGACAAAAAGTAAAAGAAGTGGAGAGAAGAAAGTGATTGTTCTGTTTCATAAAAGGCATTCAATTTTTTATTTATTTTTTGAC 2384 0.4023 MGSNGSKASSSSCSSSSSSSGSLRKARSKSLKVFQSFCLGTSSGSHDSDNEDQDIGIVKWGLLVATSIMQPRILFSVRWIGFRRIVVLKLSCILSVCDQNKVNGSDVTYADANGTNSDEVKEESFRKVKTDEMTCMPSNTSSRNDSSSIDSSSTHSLNPTSHFLSQFSLIPSNVSFRLSRTTSLGSSRPCPVSSASLSISDNEEEHNLHPGSSGSLINRSETQQSSNLLPESFFNKINAQCHEEASNNSRSNVPTSAVLGRNLHSDPTDGVRTREGPDVNLFSPRNQTETENVDTRRIDRRNGAQEPVEQNVRFSRTLSVGRLRDRVVRRSTLSDLALLPLQQEREQLRDVNLPSQDTDRQAMDGDSRVLPSDHSTIYSSTARYTPSSMSNSMFSIQDYEVETSQLREGRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRNHDTNSNNDTGARASISRIVMLAEALFEVLDEIHQQSVVLSRPSVSSIGSVPAPNDVVDSLPVKLYEKLHKHQEDAAQCYICLVEYEDGDNMRVLPCHHEFHRTCIDKWLKEIHRVCPLCRGDICISDSTPTENSSG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00540 603 MobiDBLite consensus disorder prediction 290 306 - -
Pste7g00540 603 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 97 599 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 182 201 - -
Pste7g00540 603 SUPERFAMILY RING/U-box 523 594 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 244 262 - -
Pste7g00540 603 FunFam Putative RING zinc finger domain superfamily protein 514 592 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 111 155 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 116 130 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 133 155 - -
Pste7g00540 603 SMART ring_2 545 586 IPR001841 -
Pste7g00540 603 ProSiteProfiles Zinc finger RING-type profile. 545 587 IPR001841 -
Pste7g00540 603 MobiDBLite consensus disorder prediction 182 224 - -
Pste7g00540 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 509 591 IPR013083 -
Pste7g00540 603 MobiDBLite consensus disorder prediction 244 310 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 209 224 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 1 23 - -
Pste7g00540 603 MobiDBLite consensus disorder prediction 354 373 - -
Pste7g00540 603 Pfam Ring finger domain 544 587 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00540 Pste-Chr7 5041980 5047577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00540 274 594 C3H Transcription Factor Family AT5G45290 60.725 5.08e-117 357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00540 7 5041980 5047577 Pste7g00540 7 5041980 5047577 ECH
Pste1g03612 1 17177687 17183191 Pste7g00540 7 5041980 5047577 PCT