Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00536 ATGGACGTGGAAGAATCTAACCCTTTAGACAGTGAAGTTCAACCAACCACTTCATCATCCTCCATAACCATTACTCCCTCCACCTCCTCTTCCTCTTCCATAGAAGAAGCCACCAACACTAAGGAGAAAAAGAAGAAGAGAACCAATAATATTAGTAATGATGGGAAGCACCCTACGTATAGAGGAGTGCGCATGCGTCAATGGGGCAAATGGGTATCCGAAATTAGAGAGCCAAGGAAAAAATCAAGAATTTGGCTTGGCACTTTTCCCACGCCGGATATGGCAGCTCGAGCTCATGACGTGGCGGCTCTCACTATCAAAGGCAGCTCGGCTTACCTTAATTTCCCTGAATTAGCCGCCGAGCTGCCCCGCCCCGCCAGCACCTCCCCCAAGGACATCCAAGCTGCGGCGGCCAAGGCGGCGGCCTTAGATTTTGGGCACCATAGCCATGAAGCCGAGTCGGAGCTGAGCCGAGCAATCTCCTCCTCAGTGAAGGATGAGGATGACACATTCTTGGACCTTCCTGATCTCTCTCTGGACTTGCACAACCATGGTGCTGATGAGTTTCATTATTTCTCGGCTTGGCTTGTAGCCGGAGCCGAGCATGTAGAGTTGGGTTTCCGGCTTGAGGAGCCTTTTCTATGGGAATCATATTAA 657 0.5068 MDVEESNPLDSEVQPTTSSSSITITPSTSSSSSIEEATNTKEKKKKRTNNISNDGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAELPRPASTSPKDIQAAAAKAAALDFGHHSHEAESELSRAISSSVKDEDDTFLDLPDLSLDLHNHGADEFHYFSAWLVAGAEHVELGFRLEEPFLWESY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00536 218 FunFam Ethylene-responsive transcription factor 2 58 117 - -
Pste7g00536 218 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Pste7g00536 218 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Pste7g00536 218 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Pste7g00536 218 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
Pste7g00536 218 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Pste7g00536 218 Pfam AP2 domain 58 108 IPR001471 GO:0003700|GO:0006355
Pste7g00536 218 MobiDBLite consensus disorder prediction 37 52 - -
Pste7g00536 218 CDD AP2 60 118 IPR001471 GO:0003700|GO:0006355
Pste7g00536 218 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Pste7g00536 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 179 - -
Pste7g00536 218 MobiDBLite consensus disorder prediction 1 60 - -
Pste7g00536 218 MobiDBLite consensus disorder prediction 9 36 - -
Pste7g00536 218 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00536 Pste-Chr7 4970730 4971386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00536 44 214 AP2-EREBP Transcription Factor Family AT2G44940 49.057 3.83e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste7g00536 AP2 8.2e-13 CL0081