Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00526 GCCACATTTGATGCTCTCGTGATCATCAGCACAAGCACAAGAAGCCTTATCCTCATGGCACCAAGGATTAATGATGCAACTAGCAAGAGAGCAGTGAACAGAGGTGCATGGACCCCAGAGGAAGACACTAAGCTAGCACAGTGCATTGAAATTCATGGTGCTAAGAGGTGGAAAACTATTGCAATCAAATCTGGTTTAAATAGATGTGGGAAGAGTTGCAGATTGAGGTGGCTAAACTATCTGAGACCCAATATAAAGAGGGGAAACATATCAGATGAAGAAGAGGATTTGATTCTCAGGCTTCACAGACTTTTGGGAAACAGGTGGTCTTTGATAGCAGGAAGACTTCCAGGACGAACAGACAATGAAATTAAGAATTACTGGAATTCTCATTTGTGCAAAAAAGTGAATGAGAGAGAGGAGAAAGCAGAATCCTCAAGGACACAGGAGATTATTATTGCACAGAATGAGAATGCAGGGGACAACCGTGCTATGTCAGAGACTGAGAATGAGAATGAGGTTGAAATTAACGAAAGTGGTAACAACTTTGATTTTAACTTCGACGTGGACGAATTCTTCAACTTCTCTGAGGAGTCCTACGGGTTCGATTGGCTGAACAAGTACTTAGAACTTGACCAGATTCCTGAGACCACAGAAACATCTGAATGAGTATTTTGTACTATACATCACTGCCTGCAATAAAGTTCCATATTCTTATTCTGTGTCAAA 729 0.4129 ATFDALVIISTSTRSLILMAPRINDATSKRAVNRGAWTPEEDTKLAQCIEIHGAKRWKTIAIKSGLNRCGKSCRLRWLNYLRPNIKRGNISDEEEDLILRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVNEREEKAESSRTQEIIIAQNENAGDNRAMSETENENEVEINESGNNFDFNFDVDEFFNFSEESYGFDWLNKYLELDQIPETTETSE 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00526 222 FunFam MYB-related transcription factor 33 86 - -
Pste7g00526 222 SMART sant 86 134 IPR001005 -
Pste7g00526 222 SMART sant 33 83 IPR001005 -
Pste7g00526 222 CDD SANT 36 81 IPR001005 -
Pste7g00526 222 CDD SANT 91 132 IPR001005 -
Pste7g00526 222 SUPERFAMILY Homeodomain-like 32 128 IPR009057 -
Pste7g00526 222 Gene3D - 90 162 - -
Pste7g00526 222 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 27 164 - -
Pste7g00526 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 85 IPR017930 -
Pste7g00526 222 ProSiteProfiles Myb-like domain profile. 82 132 IPR001005 -
Pste7g00526 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 136 IPR017930 -
Pste7g00526 222 Pfam Myb-like DNA-binding domain 87 132 IPR001005 -
Pste7g00526 222 Pfam Myb-like DNA-binding domain 34 81 IPR001005 -
Pste7g00526 222 ProSiteProfiles Myb-like domain profile. 29 81 IPR001005 -
Pste7g00526 222 Gene3D - 26 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00526 Pste-Chr7 4876727 4879335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00526 28 146 MYB Transcription Factor Family AT5G52600 64.706 9.69e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste7g00526 Myb_DNA-binding 1.8e-17 CL0123