Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00521 ATGGACAACAATGATCACGAGCCTCTGTTGCATGGCAAAGTCGGCACCCTTCTAATAGCCATGGCTTCAGCCAGCTTCGTCGTCACAATGTTCCACCTCATTATCCTCTGCCGCACCCACCGCCACGTCACCAACCAACCCTCCCAACACCGCCCCCGTCCCGCACCACCGCCACCTCCCCCATCGCGGAACACCGTACACAACGCTTCCGCCCTGCCGCACCTGATTCCGGCCCACAAAGATGGCGAGGAGGATGGGACGTGCGCGGTGTGCTTGGGAGACTTCGAAGAGGGTGAAGAGCTGAGGACGTTGCCGGAGTGCGAGCACTCGTTCCACGTGGCGTGCATAGACACGTGGCTGCTTTCGCATTGGAGCTGTCCGGTTTGCCGGGCTGAGGCTACGCCGTCGCCTGCGGTGGGGCACCTGCCGCCGGAGTTTGGTTCCGGCGATGAGGTGAATGAGCATCATCGCAGCATTGATATCGTGGAAATGGGTCCCATTCACAATGGGTTGGCTGCGTCACGCGAAATACTGAGGTGA 540 0.6037 MDNNDHEPLLHGKVGTLLIAMASASFVVTMFHLIILCRTHRHVTNQPSQHRPRPAPPPPPPSRNTVHNASALPHLIPAHKDGEEDGTCAVCLGDFEEGEELRTLPECEHSFHVACIDTWLLSHWSCPVCRAEATPSPAVGHLPPEFGSGDEVNEHHRSIDIVEMGPIHNGLAASREILR 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00521 179 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Pste7g00521 179 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 134 IPR044675 -
Pste7g00521 179 CDD RING-H2_EL5-like 88 130 - -
Pste7g00521 179 MobiDBLite consensus disorder prediction 44 68 - -
Pste7g00521 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 137 IPR013083 -
Pste7g00521 179 SUPERFAMILY RING/U-box 72 136 - -
Pste7g00521 179 Pfam Ring finger domain 87 130 IPR001841 -
Pste7g00521 179 MobiDBLite consensus disorder prediction 50 64 - -
Pste7g00521 179 SMART ring_2 88 129 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00521 Pste-Chr7 4838830 4840058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00521 88 130 C3H Transcription Factor Family AT3G10910 69.767 5.04e-19 78.2