Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00517 TAATGTTGATCCTGTTGTTTTCTTTTGTTCCTGTATTGCCATTGTTTCATCTGTAGCAATGGTTAAGCATAACAACGTTATCCCCAATGGGCACTTCCGTAAACATTGGCAAAACTATGTGAAGACTTGGTTTAATCAACCAGCACGGAAGACCAGAAGACGATTGGCTCGTCAGAAGAAGGCTGTTAAGATTTTTCCTAGGCCTACAGCTGGACCTCTCAGGCCTATTGTTCATGGTCAGACTTTGAAATACAACATGAAAGTCAGAGCTGGGAGAGGATTTTCTCTTGAAGAATTGAAGGCTGCTGGTATTCCCAAAAAACTTGCTCCAACTATTGGGATTGCGGTTGATCATCGTCGCAAGAATCGTTCTCTGGAGAGTATGCAGGCTAATGTGCAGAGGCTCAAAACATACAAGGCCAAGTTGGTTGTGTTCCCAAGACGGGCACACAAGGTTAAGGCTGGGGATTCTAGCACTGAAGAATTGGCTAATGCTACTCAAGTCCAGGGTCCATTCTTGCCCATTGTGAGGGAGAAGCCAACTGTTGACCTTGTTAAGGTAACAGATGAAATGAAGGCATTCAAAGCTTATTATAAGCTTCGTCTTGAGCGCACCAACAAACGCCACTATGGTGCCCGCCTAAAGAAAGCAGCTGAAGCAGAGAAGGAAGACAAGAAATGATGTGCTTGAGTATCCAGTTTGTAATCCTTATTTTTTATATAGATGTGAGAAATTTTTGTTTGAGGTCCTGCACCCTTAGCTTTATGGAGATCATGAGTTTTAAGACATCTCTTACAATTTTTTTTTGTGAACTCAAGTCTGTTAATTGAATTATCACTCCGTTTTGTTTTGATTATTTCTTTAATTTTCTCCCCATTATGGTTGTTCAAGTTGTATTTTTTAAATGCATGTTTTCCGGGCATTCATTTCAA 933 0.4073 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNRSLESMQANVQRLKTYKAKLVVFPRRAHKVKAGDSSTEELANATQVQGPFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLERTNKRHYGARLKKAAEAEKEDKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00517 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Pste7g00517 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Pste7g00517 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
Pste7g00517 207 Gene3D - 167 207 - -
Pste7g00517 207 FunFam 60S ribosomal protein L13 166 207 - -
Pste7g00517 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00517 Pste-Chr7 4823595 4825226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00517 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 85.864 1.08e-124 349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00192 1 703333 704558 Pste7g00517 7 4823595 4825226 PCT