Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00514 CGAACACCAAACGAACAAAACCTCCTCTGAGATCGCTGTTCGGAGCCGCATTGTTTCGACCGCGCCTAAGGTGGCGAGGAAATGATTGATGGAGTCCGGTGAGAACGAGCGCGTGACGATTCGCGAGTTCTGCGCGAATGGAACTTGCATGAAAGCAACGGAACTTGAGGCAAAGCTTGATGAAGGAAATATTCAAGAAGCGGAATCAGCATTACAGGAAGGGTTGTCGATAAATTCTGAGGAAGCAAGGGCTCTTCTTGGAAAGTTAGAATATCAGAGAGGCAATGTGGAAGGTGCTCTTCGTGTGTTTGATGGAATTGATCTTCAAGCAGCCATACCGAGATTGCAAAGTTCCCTTTCTGAAAAAACACCCACCAAGAAAGCTCCCACTGGCCCTGAATCACCTTCCTCTGTCTACCAGAATGCAGCTACTTTGGTGCTTGAAGCCATCTACTTGAAAGCCAAGTCTCTGCAAAAATTGGACAAATTTAGCGAAGCTGCTGATGAATGCAAACGTGTTCTTGATGCTGTTGAGAAGATATTTAGTCAGGGTATACCTGATACACAAGTGGACAATAAATTGCAGGAGATAGTCAGCCGTGCAGTAGAGCTCCTTCCAGAGCTTTGGAAACAGGCTGGTTGCTATAATGAAGCGTTGTCTGCTTATAGGAATGCCCTTCTTAGTCAATGGAACCTTGATAATGATAGCTGTGCAAGAATTCAGCAGGCATTTGCTGTGTTTTTGCTGCACAGTGGGGTGGAGGCAAGTCCACCTAGTTTAGCCGTTCAGACTGAGGGATCTTATGTACCCAAGAATAATCTGGAAGAGGCAATTCTACTTCTAATGATTCTTTTGAGAAAGTTTAGCCAAGGTAAGATAAAGTGGGATCCTTCTATTATGGAACATCTGACTTTTGCGCTTTCAGCATGTGGTCAAACTTCTACATTAGCCAAGCAATTTGAAGAGTTGACACCTGGTGTATATCACCGTATTGACCGGTGGTGTTTTTTGGCTCTATGTAATAGTGGAGCCGGAGAAAATAAAAGTGCTTTGAATCTGCTAAGGATGTCTTTGCATAAACACGAACGGCCAGATGACCTTACATCATTATTATTGGCTGCCAAGATTTGCAGTGAGGATCCTCATCTTGCTGCTGAGGGAGCAGGATATGCACAGAGAGCAATCGATAATGCTCAGGGCTTAGATGAGCATTTGAAAGGTGTTGGTCTTCGGATGTTGGGACTTTGTCTGGGAAAGCAAGCTAAGGTTTCTTCTTCTGACTATGAGAGGTCTATGCTTCAATCCAAAGCTCTGCAATCGTTGGAGGAGGCAATTAGACTGGAGCGAAACAATTCTGATCTAATTTTTGAACTGGCTATTCAATTTGCCGAGCACCGAAATTTAACTGCTGCTTTATCCTTTGCCAAGCAGTTCTTTGACAAAACTGGTGGCTCTAAATTGAAAGGTTGGAGATTGCTTGCTCTAGTTTTGTCTGCACAAAAGAGATTTTCAGAGGCTGAAGTGGTGACTGATGCTGCTTTAGATGAGACTGCAAAATGGGAGCAGGGGCCACTGCTTAAGCTGAAGGCCAAGTTAAAGATCTCCCAATTACGACCCATGGATGCCATTGAAACTTACCGGTACCTACTTGCATTGGTTCAAGCCCAGAGGAAATCATCTGATAGTTCACAGGTTGAGGATTATAAGATAAATGAATTTGAAGTTTGGCATGGTCTGGCAGCTTTATATGCAAGCCTTTCTCACTGGAAGGATGCTGAAATCTGTGTGCAAAAGGCCAAAGAGTTAAAGGAATTCTCAGCAAAAACAATACATGCTGAAGGCAAGAACAGAATCTTTAGGCTGTTAAAAATTTCTACTTTAGCATGTCCGATTCGTATTATGTTGGACGGTCGTGGAGAAAATCAAGAAGCTCTTATTGCTGCTTTCAATGCGATCCTATTTGAACCAAACTATGTGCCAAGCAAGATCTTGATGGCTTCTTTGATACTGAAAATGGGTTTTAATGCTTCACCTGTTGCCAGAAGCTTACTTTCTGATGCACTTAGAATAGAACCTACTAACCGCAATGCTTGGTATTACTTGGGATTAACTCACAAGACTGATGGCCGAATAGTTGATGCTGCTGATTGCTTCCAGGCAGCTTCCATGCTGGAAGAATCTGATCCCATTGAAAATTTCAACTGCATGCTTTGACCAGATTCCAGTCTCAGATAGTTAACTCTGCCCTCAGATTCATATCATTCTGTTATCGGTTATTTTTTGCAAGAGACCAAAGGTTATTCTTGGAAGCAATGCTGCTTGAGTCAGGTATGGTTCTGTTGTCAATTTTGAAAATGTATCCCCCTTCCCTCGTTCCTTCTTTTTTCATTAAAAATTCTTATTATAAGGAGCTAGGCTTGAAGCAAAAGAGTTGGATTAAATCATAAAGTAGGAAATAAGATAAGAACGGGTCAATCTAGTTGTAGGGTGGATGAATTGTAAAGAACATGGGAGTTTTTATCGTTGTTGGGATCCTCTTTTGCCTTGTAAATGTGAGATGC 2562 0.4254 MESGENERVTIREFCANGTCMKATELEAKLDEGNIQEAESALQEGLSINSEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIPRLQSSLSEKTPTKKAPTGPESPSSVYQNAATLVLEAIYLKAKSLQKLDKFSEAADECKRVLDAVEKIFSQGIPDTQVDNKLQEIVSRAVELLPELWKQAGCYNEALSAYRNALLSQWNLDNDSCARIQQAFAVFLLHSGVEASPPSLAVQTEGSYVPKNNLEEAILLLMILLRKFSQGKIKWDPSIMEHLTFALSACGQTSTLAKQFEELTPGVYHRIDRWCFLALCNSGAGENKSALNLLRMSLHKHERPDDLTSLLLAAKICSEDPHLAAEGAGYAQRAIDNAQGLDEHLKGVGLRMLGLCLGKQAKVSSSDYERSMLQSKALQSLEEAIRLERNNSDLIFELAIQFAEHRNLTAALSFAKQFFDKTGGSKLKGWRLLALVLSAQKRFSEAEVVTDAALDETAKWEQGPLLKLKAKLKISQLRPMDAIETYRYLLALVQAQRKSSDSSQVEDYKINEFEVWHGLAALYASLSHWKDAEICVQKAKELKEFSAKTIHAEGKNRIFRLLKISTLACPIRIMLDGRGENQEALIAAFNAILFEPNYVPSKILMASLILKMGFNASPVARSLLSDALRIEPTNRNAWYYLGLTHKTDGRIVDAADCFQAASMLEESDPIENFNCML 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00514 708 SMART tpr_5 544 577 IPR019734 GO:0005515
Pste7g00514 708 SMART tpr_5 666 699 IPR019734 GO:0005515
Pste7g00514 708 SMART tpr_5 458 491 IPR019734 GO:0005515
Pste7g00514 708 SMART tpr_5 118 151 IPR019734 GO:0005515
Pste7g00514 708 SMART tpr_5 302 335 IPR019734 GO:0005515
Pste7g00514 708 SUPERFAMILY TPR-like 540 693 IPR011990 GO:0005515
Pste7g00514 708 Gene3D Tetratricopeptide repeat domain 396 594 IPR011990 GO:0005515
Pste7g00514 708 Gene3D Tetratricopeptide repeat domain 25 200 IPR011990 GO:0005515
Pste7g00514 708 Coils Coil 21 41 - -
Pste7g00514 708 SUPERFAMILY TPR-like 406 574 IPR011990 GO:0005515
Pste7g00514 708 Gene3D Tetratricopeptide repeat domain 603 706 IPR011990 GO:0005515
Pste7g00514 708 PANTHER PROTEIN NPG1 5 705 IPR043376 -
Pste7g00514 708 SUPERFAMILY TPR-like 119 450 IPR011990 GO:0005515
Pste7g00514 708 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00514 Pste-Chr7 4805014 4811343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00514 2 708 Calmodulin-binding Proteins AT2G43040 68.627 0.0 947