Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00504 GCTCCACTCTCTCATATCCTAAAATGGAGAAAACAAGATCCTCAGACCAAGTTGTTCTCTTCCTCGACCAACAAAACCCTAAACCACCCTCCATGGAAGGCGAAAACCAACAAGAGAAACCCAAATCCAAACACCCCTTAAAAGTCAAAACACTTAACCGTCTCAGCTTCTCAAAACCCAAATCCCGAATCCTAGAATACAACTATGTGCCACGCAACAAAGTTGGAACAACCTCGGAGGAAATTGACATCATTCAACCGAGTTATAAGCTCTCTTCAAACAACGACAATAATAATGATGACGACGAGGATGATCGTGAATGGGATGAAGAGGAGGAGGAGGGGGAGGAGCATGGCCCCAAGTTGAAGCAAAAGAGAAAGTGCAAAATCAAGTGGAGGCTTGTTATGGAATGGGCTTTGTTCCTTAACATATTAACATGCTTGGTGTGTTCTTTGACCATATCTTCCATAACCAACATGCATGTGTGGGGATTGGAGATTTGGAGATGGTGTTTGATGGTAATGGTCACATTCAGTGGCCGTTTGGTTTCAGGATGGGTGGTTGGTGTGATAGTGTTCATCCTGGAGCGAAACTTCATGCTGCGAGAAAAAGTGTTATACTTCATCTACGGTCTGAGAAACAGCATAAGAAACTGTTTATGGCTAGCCCTAGTGCTCATCTCGTACTGGAGTGTGGTATTCGACGACGTTCAAAAGAAGAACCACAAATTTCTCAACAAGGTGTTCCAAGCCCTAGTGGCAGTGCTTGTGGGGGCAACCATTTGGCTCGCCAAAATCGTGTTGGTTAAAATGCTGGCATCCTCGTTCCACGTCACCACTTACTTCGACAGAATGAAGGAGAGTGTCTTCCACCACTACATCTTGGACACGCTCTCGCGTCCTCCTATGGAGGACGCAGAGCAGCATAACCACCACCTCGTGGGGTCGATGTCGATGTCGATGCCCGCGAGGTGGACAAGGTCGTCCAAGAGGTTTGGGTCAAGGAAGATTGACATGGAGAAGCTTAGGGAGCTTAGCATGGAGAGCAGTGCTTCTGCTTGGAGCGTGAAGAGGCTCGTTAACTATGTTAGGTCTTCTGGTTTGTCCACCATTTCTAGGACTGTTGATGATTTTGGGAATGCTGAGTCTGAGATTAATAGTGAGTGGGAAGCTAGGAACTGTGCCCAGAGGATTTTCAAGAACGTTGCCAAACCTGCTGCCAAGTATATTGAAGAGGAGGATCTGATGAGATTTTTGAAGAGGGTTGAGATACACACCATATTTCCACTCTTTGAAGGTGCAATTGAAACTGGACAAATCAGCAAGTCTTCATTTAGAAATTGGGTGCAGCTTCACAAAATAGCAAGTGCAGTTGTTAGTGTGATAATAATCATTGTGATGTTTTTGCTGATGGAGGTGGCTACACCAAAGGTAATATTATTCGTTATTACACAAACGGTTTTGATAGGTGTTGCCTTCCAAAGTACTTGCAAGACTGTGTTGGAGGCCATCATCTTTGTCTTCGTCATGCACCCTTTTGATATTGGAGACAGATGTGTCATTGATGGAGTTCATATGATTGTGGAAGAGATGAATATCTTGACAACAGTGTTTCTTCGATATGACAATGAGAAAATATACTATCCTAACGCAGTTTTACTTAATAAGCCTATAAGCAATTTCTATAGGAGTCCAGAGATGTGGGACTCCATTGATTTCACCATTGATGTTTCATCTTCCATGGAAACCATCTTAGCCCTCAAGAAAGCAATACAAATGTACATTGAGAGCAAGCCAAAGTATTGGAATCCAAAACACAGTTTTATAGCAAAAGGAATTGATAATGTGGACAAGCTGAAGTTGTGCTTATCTGTGCAACATACCATCAACCATCAAAACTATGGTGAGCGAAACATTAGGATAACGGAGCTGCTCTTGGAATTGAAGAAGATCTTTGAGATCCATGATGTCAAGTATCATCTTCTTCCTCAGGAGATTCAGATTACCCATATGAATATTGAACATGGGAAAGTTCTGTTTCAATCC 2045 0.4308 MEKTRSSDQVVLFLDQQNPKPPSMEGENQQEKPKSKHPLKVKTLNRLSFSKPKSRILEYNYVPRNKVGTTSEEIDIIQPSYKLSSNNDNNNDDDEDDREWDEEEEEGEEHGPKLKQKRKCKIKWRLVMEWALFLNILTCLVCSLTISSITNMHVWGLEIWRWCLMVMVTFSGRLVSGWVVGVIVFILERNFMLREKVLYFIYGLRNSIRNCLWLALVLISYWSVVFDDVQKKNHKFLNKVFQALVAVLVGATIWLAKIVLVKMLASSFHVTTYFDRMKESVFHHYILDTLSRPPMEDAEQHNHHLVGSMSMSMPARWTRSSKRFGSRKIDMEKLRELSMESSASAWSVKRLVNYVRSSGLSTISRTVDDFGNAESEINSEWEARNCAQRIFKNVAKPAAKYIEEEDLMRFLKRVEIHTIFPLFEGAIETGQISKSSFRNWVQLHKIASAVVSVIIIIVMFLLMEVATPKVILFVITQTVLIGVAFQSTCKTVLEAIIFVFVMHPFDIGDRCVIDGVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDSIDFTIDVSSSMETILALKKAIQMYIESKPKYWNPKHSFIAKGIDNVDKLKLCLSVQHTINHQNYGERNIRITELLLELKKIFEIHDVKYHLLPQEIQITHMNIEHGKVLFQS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00504 674 MobiDBLite consensus disorder prediction 1 47 - -
Pste7g00504 674 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 17 441 IPR016688 -
Pste7g00504 674 MobiDBLite consensus disorder prediction 78 112 - -
Pste7g00504 674 MobiDBLite consensus disorder prediction 9 25 - -
Pste7g00504 674 SUPERFAMILY Sm-like ribonucleoproteins 495 553 IPR010920 -
Pste7g00504 674 MobiDBLite consensus disorder prediction 90 107 - -
Pste7g00504 674 FunFam Predicted mechanosensitive ion channel 504 553 - -
Pste7g00504 674 Pfam Mechanosensitive ion channel 445 650 IPR006685 GO:0016020|GO:0055085
Pste7g00504 674 PIRSF Memb_At2g17000 4 442 IPR016688 -
Pste7g00504 674 PIRSF Memb_At2g17000 441 671 IPR016688 -
Pste7g00504 674 Gene3D - 504 553 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00504 Pste-Chr7 4732599 4740770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00504 20 664 Mechanosensitive Ion Channel Family AT5G12080 41.185 1.61e-173 511