Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00485 CAACAGTTGATGCTGATAGTAATGAACCTCGAGGTACCCAATTGATCTGCTTTTGTGGTTCCACATATTACATCTCTGGTTAACTACACAATCACTCCATTTTCAGCGCTTTCCATGCTAATGTTGTAGTGTTATCTTATGGCTCCTCTCTTCATCGCCCTGCAAATGCTTCTGCTACTTTTCAGTTCCATATTATTGCATGCAATAACCGTTACATGCACCCCAAAAATATTGTCTTCCACAAACTCATCGCAGTGGGTGGTGAGGCCCACAGGACACCGAGTAATCACCGTTGACAGTAACAGCGGAGGCCATTTCCGATCAGTCCAAGACGCCGTCAACGCTGTCCCGGAGAACAACAGAATGAACGTGCTTATTCAAATAAGCGCGGGATATTACATAGAGAAGGTGGTTGTGCCGGTGACGAAGCCGTACATAACGTTTGAAGGGGCGGGAAGAGATGTGACGGTGATAGAATGGCATGATCGAGCGAGTGACCCTGGCCCCAACGGCCAACAACTGCGTACTTACAGAACTGCTTCTGTTACTGTTTTTGCCAACTATTTCTCGGCCAGAAATATCAGCTTCAAGAATACAGCGCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAAGCGGCGGCGTTTCGCATATCGGGGGACAAAGCGTATTTCTCCGGCTGCGGATTCTACGGGGCACAAGACACTCTTTGCGACGACGCTGGGCGCCATTATTTCAAAGAATGTTACATCGAGGGCTCCATAGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCAAGCTACACTCAATTGCGACGAGGTTCGGGTCGATAGCGGCCCAAGATAGGAAATCCCCATACGAGAAGACGGGGTTCGCATTCGTAAGGTGCAAGGTGACAGGAACAGGGCCCATTTATGTGGGCCGTGCAATGGGCCAGTACTCTAGGATTGTCTATGCCTACACCTATTTCGACGACATAGTTGCACATGGTGGTTGGGATGATTGGAACAATTGCAACAACAACAAGAAGACAGTGTTCTTTGGAGTGTACAAATGTTGGGGACCAGGCGCAGCGGCTATACGGGGAGTCCCATTGGCCCAAGAGCTTGATTTTGAATCTGCCCATCCATTCCTGGTCAAGAGTTTTGTCAATGGGAGACATTGGATTGCACCCTCCGATGCTTAGCTAACTGCCATTCCAAATCAACCTACATGCTACTTCACTTTCTTTAAGAGCTACCAAAGGAAGATATTACACTATTCAGTATCATTATGCCCGTTTTTGTCTTGTTTTTAACCATAGGAAATTCATTCATTCAATCTTTCATACCAGCCTTTTGTTCTTGTTCCATAACTGCCAGATATACTCGAGAGCCTCATTAATATATTCATTATTCTTTTATCTCTTTCAAATGTAATCAATTCTTAAATTTTCTTCTTTTTTTTTTTTTTGCCGTGTATCTGGGAGCTACATTTACTGCAATCTTTGGGCTGGCGGGGGGTGCTTACTTCTTGGCGTCAAAAGATTCAGGTGATGCATATAGATCATGTAAAGGA 1565 0.4594 MAPLFIALQMLLLLFSSILLHAITVTCTPKILSSTNSSQWVVRPTGHRVITVDSNSGGHFRSVQDAVNAVPENNRMNVLIQISAGYYIEKVVVPVTKPYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCKLHSIATRFGSIAAQDRKSPYEKTGFAFVRCKVTGTGPIYVGRAMGQYSRIVYAYTYFDDIVAHGGWDDWNNCNNNKKTVFFGVYKCWGPGAAAIRGVPLAQELDFESAHPFLVKSFVNGRHWIAPSDA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00485 351 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Pste7g00485 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 39 347 - -
Pste7g00485 351 FunFam Pectinesterase 45 348 - -
Pste7g00485 351 Pfam Pectinesterase 50 342 IPR000070 GO:0030599|GO:0042545
Pste7g00485 351 Gene3D - 45 350 IPR012334 -
Pste7g00485 351 SUPERFAMILY Pectin lyase-like 47 348 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00485 Pste-Chr7 4598692 4602581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00485 4 351 Carbohydrate Esterase AT5G47500 72.414 0.0 532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00485 7 4598692 4602581 Pste7g00485 7 4598692 4602581 ECH