Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00471 ATGGAAGAAGACCAAGAGGCTCAAAGGGAAAATCGAGGGGCTATGGCTGGTGGTGAAGGAGAAGGGTCAGAGGGTAATAGAGAAGGTGTTAGCAACAATGAGCATCGTACTTGGATGTGTCATACCTGCAACAAAGGCTTCAGCTCAGGTAAAGCTCTTGGTGGGCACATGAGAATACACAATCTTTCCAAGAAGCAGGTTCATGGTGTCAAAGCCAAACAAGGCACTAGTAAGACCAACAAATGGGTTGTTGGTGTGAGTGGCAGCCCCACTTGTTCCCTTTGTGGGAAGAGCTTCTCTTCCATGAAGTCCTTGTTTGGACACTTGAGGTCTCACCCTGAGAGGGTTAGGAGGGGAATTCAACCACCTCCCAATAGCATCCTAAACAATGGTGCTTCTTGCTCCAATTCCACTTCTTCCTCAACCCTTTCTGATGATTCTGCTGTTGATCTCTCTCAAGCTCTTAGGGGTTGGTCTGTTACTGCCAAGAGAGGCCGCAGAAGCCCTTGTTCTAGCAAATCAAATTCTGGTTTGGAAGATGATGGGGAAATTGAGCCACGTATGCAAGAGGCTGTGTATGAGCTCATGTTGCTGGCTAGTGGGAATCCTAAGTGGGAGGAAGATGATCAGGTTGAAGAGAAGCCATTGATCAAGAAAGGTTATGAAGAGGAATTGTTAAAGCCAGATTTTGGGGATTCTATTGACATGAAGATCAAAAAGAGGAATAAAAAGAAAGTCGCAAAGAGATTGAAATTAACAGAATTAGAAGATGTTGAGGAGGGGAGAAAGTTGGTTAGATGCAGAATATGCAATTCAACTTTCACAAGTCACCAAGCTTTGGAGGGTCATGTATGCAGGCTTAAGGAGGAATCTGAACCAGATGATGTGTCAGCAACAGAAGAGGAACATCATGGTGCCAAAGGAACAACCAAGCTAGAGTGTGAAACAGGAGCTGTTATTGGGTTTAGTGCTGTGGAAGCCATGAGAGGGCATCAATGTAAAATTTTCGACAAGACTTTCACAACTGGTCAAGTCTTTGGGGACCACAAGATATCTAATTGGACCAGCATGGCAGAAGCTCAGTCACCTCAAGCAACTTCTTCTTCACCTGCGGAAAATGTTCAGAATTGTTCCAAGATTTTGAGTTTTGATCTTAATCAGCCCCCAGCTATGGATGTGGAAGATGTTGTTCAATCAGACTTGTCTATTCCTACCAATATTGTGACATCATCCAGTTATGCTTTTTCCTCCAAAAACACTCTTACTAATTAG 1272 0.4403 MEEDQEAQRENRGAMAGGEGEGSEGNREGVSNNEHRTWMCHTCNKGFSSGKALGGHMRIHNLSKKQVHGVKAKQGTSKTNKWVVGVSGSPTCSLCGKSFSSMKSLFGHLRSHPERVRRGIQPPPNSILNNGASCSNSTSSSTLSDDSAVDLSQALRGWSVTAKRGRRSPCSSKSNSGLEDDGEIEPRMQEAVYELMLLASGNPKWEEDDQVEEKPLIKKGYEEELLKPDFGDSIDMKIKKRNKKKVAKRLKLTELEDVEEGRKLVRCRICNSTFTSHQALEGHVCRLKEESEPDDVSATEEEHHGAKGTTKLECETGAVIGFSAVEAMRGHQCKIFDKTFTTGQVFGDHKISNWTSMAEAQSPQATSSSPAENVQNCSKILSFDLNQPPAMDVEDVVQSDLSIPTNIVTSSSYAFSSKNTLTN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00471 423 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Pste7g00471 423 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Pste7g00471 423 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 112 IPR013087 -
Pste7g00471 423 SMART c2h2final6 38 60 IPR013087 -
Pste7g00471 423 SMART c2h2final6 265 285 IPR013087 -
Pste7g00471 423 SMART c2h2final6 90 112 IPR013087 -
Pste7g00471 423 SUPERFAMILY beta-beta-alpha zinc fingers 36 112 IPR036236 -
Pste7g00471 423 Gene3D Classic Zinc Finger 16 116 - -
Pste7g00471 423 Pfam C2H2-type zinc finger 40 60 - -
Pste7g00471 423 Pfam C2H2-type zinc finger 266 283 - -
Pste7g00471 423 Pfam C2H2-type zinc finger 92 114 - -
Pste7g00471 423 MobiDBLite consensus disorder prediction 1 31 - -
Pste7g00471 423 MobiDBLite consensus disorder prediction 123 146 - -
Pste7g00471 423 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 81 392 IPR044653 GO:0003700
Pste7g00471 423 MobiDBLite consensus disorder prediction 115 146 - -
Pste7g00471 423 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Pste7g00471 423 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00471 Pste-Chr7 4499117 4500388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00471 36 126 C2H2 Transcription Factor Family AT2G26940 38.532 1.06e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste7g00471 zf-C2H2_6 3e-07 CL0361