Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00470 ATGCTGCTCTTGCCTCTAAGCCACACTCTTTCCCATGCCCAATTCAACAGCACCCACCACCTCCTCAAATCCACCTCCACCCGTTCCGCCGCCCGCTTCCGCCGCCAACTTTCCCTCCCTCTCTCCCCTGGCAGCGACTACACTCTCTCCTTCAGTCTGGGCCCCCAGGCCCACCCCCAGCTCGTTACCCTCTACATGGACACAGGCAGTGACTTAGTCTGGTTCCCCTGCGCCCCCTTCAATTGCATACTCTGCGAGGGAAAGCCCAACATCTCTTCCCCCACCAATATCACCCGAAGCGTCGCCGTTTCATGCTCCTCCCCCTCCTGCTCCGCAGCCCACAGCTTAGCCTCTTCTTCCGATCTCTGCACTATGGCTCGTTGCCCTCTCGATTCAATCGAAACCTCCGAATGCACCTCTTTCAACTGCCCACCGTTTTACTATGCCTACGGCGATGGAAGCTTAATCGCGCTTCTCTATCGTGACACGCTTTCTCTTTCTTCCTTATTTCTCCCTAACTTCACATTCGGTTGTGCTCACACTACGCTTGCTGAACCAACCGGTGTCGCTGGATTTGGTCGCGGTTTACTCTCTCTCCCAGCCCAGCTAGCCACACTCTCTCCGCAACTCGGAAACCGCTTTTCCTATTGCCTCGTCTCTCACTCCTTTGACTCCAAACGAGTTCGCAAACCGAGTCCACTCATTCTTGGAAGTCACGAGGAGAAGGAGCAGATTGGTGGTGCCACTCGACTGCCGGAGTTTGCGTACACACCTATGCTTGAAAACCCTAAGCATCCTTATTTTTACTGCGTTGGCTTAATCGGAATATCCGTCGGGAACAACACTATTCCGGCGCCGGAGATGCTGCGGCGAGTGAACCAGCGAGGCGAGGGCGGCGTGGTTGTGGATTCCGGCACAACTTTCACGATGTTACCCGCGGGATTTTATAACTCGGTGGTGTCCGAGTTTGACCGCCGAGTCGGGCGAGTCAACGAGCGCGCGCATAAGATTGAGGAAAAGACGGGACTCGCGCCGTGCTACTATTTGAACAAGGTGGCAGATGTGCCGGCTGTGACGCTGCGTTTTGCGGACGGTAGTGATGGAGCGAAAGGGAAGAGGAGAGTTGGGTGTTTGATGCTGATGAACGGTGGAGATGAGAAGGAGTTGAGCGGTGGGCCCGGGGCAACACTGGGGAATTACCAGCAGCAGGGGTTTGAGGTTGTGTATGACCTGGAAGAGAAGCGCGTGGGGTTCGCCAAGAGGCAGTGCGCGTCTCTCTGGGAGAGACTCAATGGTGACAAAAACTAG 1308 0.5573 MLLLPLSHTLSHAQFNSTHHLLKSTSTRSAARFRRQLSLPLSPGSDYTLSFSLGPQAHPQLVTLYMDTGSDLVWFPCAPFNCILCEGKPNISSPTNITRSVAVSCSSPSCSAAHSLASSSDLCTMARCPLDSIETSECTSFNCPPFYYAYGDGSLIALLYRDTLSLSSLFLPNFTFGCAHTTLAEPTGVAGFGRGLLSLPAQLATLSPQLGNRFSYCLVSHSFDSKRVRKPSPLILGSHEEKEQIGGATRLPEFAYTPMLENPKHPYFYCVGLIGISVGNNTIPAPEMLRRVNQRGEGGVVVDSGTTFTMLPAGFYNSVVSEFDRRVGRVNERAHKIEEKTGLAPCYYLNKVADVPAVTLRFADGSDGAKGKRRVGCLMLMNGGDEKELSGGPGATLGNYQQQGFEVVYDLEEKRVGFAKRQCASLWERLNGDKN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00470 435 Pfam Xylanase inhibitor N-terminal 47 238 IPR032861 -
Pste7g00470 435 CDD pepsin_A_like_plant 47 423 IPR034161 -
Pste7g00470 435 PANTHER ASPARTYL PROTEASES 7 417 IPR001461 GO:0004190|GO:0006508
Pste7g00470 435 Gene3D Acid Proteases 38 237 IPR021109 -
Pste7g00470 435 SUPERFAMILY Acid proteases 44 428 IPR021109 -
Pste7g00470 435 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 300 311 IPR001969 GO:0004190|GO:0006508
Pste7g00470 435 ProSiteProfiles Peptidase family A1 domain profile. 47 419 IPR033121 -
Pste7g00470 435 Pfam Xylanase inhibitor C-terminal 269 419 IPR032799 -
Pste7g00470 435 FunFam Probable aspartyl protease At4g16563 37 236 - -
Pste7g00470 435 Gene3D Acid Proteases 247 427 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00470 Pste-Chr7 4473997 4475363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00470 17 426 Miscellaneous Gene Families AT1G44130 23.251 2.01e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00470 7 4473997 4475363 Pste7g00470 7 4473997 4475363 ECH
Pste7g00470 7 4473997 4475363 Pste2g00255 2 1618536 1622211 ECH