Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00459 ATGGCTTTTTCTGTGCTTCACTTTCTCTACTGCTCTATGATTCTTTCACCCTTTGTAACCTTCAGTGTTGTGGCTCAAACCAAAGCCAACATAGTTATTGGTGATTCTCATACTGCAGGAAGTAGCAGCTCCCCATGGTTGGTTTCATCACCTTCTGGTGACTTTGCCTTTGGGTTCCTCCCACAAGATGCAACTCCTGATCAGTTCATACTTTGTATTTGGTATGCTAAGATTCAAGAGAAAACCATAGTTTGGTTTGCCAGTAGGGACTACCCTGCACCAAAGGGCTCAAAAGTTGAGATTACTGCTGATGATGGGTTGTTGCTCACTGCTCCAAATGGTGATCAGTTATGGAAGAGTGAGGTCACTGTTAGAGCTTCTAGTGCTGTGTTTAATGATACTGGTAACTTTGTGCTTCAGGATGGTGGCTCCAACAGTGTTTGGGAGAGTTTCAAGGATTATAGAGACACCTTGTTGCCCTCTCAGACTATGGAAAAGGGTCAAAAGCTTTCTTCTAAACTTAGGAGGGATGATTTCAAGCCAGGCAAGTTTGAGCTCTTTTTTCAAAATGATGGTAATCTTGTGTTGCACTCTATAAATTTACCATCTAAGTATGCTAATAAAAACTACTTTGAAACTGGAACCATTGAGTCGGACACTTTAAGTGCTGGGAAGCAATTGATGTTTGATAGGTCAGGAGGATTGTATGTTTTGAGAGAGAACAATCAAAAGCACAACTTTTCAGAAGGGGGTAGTGGAGTTTCTGTTTCTACCACTGAATTTTACCTTAGAGCAACTCTTAATTTTGATGGGGTGTTCACATTCTATCAGCATCCTAAGGGTTCTTCTTCTGGGAGTGGAAGTTGGACCCCACTGTGGTCTGAACCTGGTAATATCTGTAAGGATAATCTGGCTGAAGCTGGTAGTGGTGTTTGTGGATATAATAGCATTTGCAATTTAGGAGATGATAGGAGACCAATTTGTAATTGTCCAAAATGGTACTCACTAGTTGATCCCAATGATCCCAACGGTAGCTGCAAACCAGATTTTGTACAATCATGTGCTGAAGATGAACTTACTAAAGGAAAGGATGTATATGAGTTTGAGGTGTTGACAGACACTGATTGGCCTCTTTCAGATTATGTGCTTCAAAAACCCTTCACAGAAGAACTATGCAAACAATCTTGTATGGAAGATTGTATGTGTTCTGTTGCCGTTTTCAGGCTAGGTGACAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGTAGAATTGATCCCACACTTAATGGTGCAAAGACCTTTATGAAAGTGAGAAAAGACAACACTTCCTTGGTTGTTCCTCCAATCATTGAGCACAAGAATAATAGGAACACCATGATTGTGGTTGGCTCAGTGCTTTTGGGGAGTTCAGCTTGTCTCAATCTCGTATTGCTTGCAGCAATTTGCTTGAGTACTTCCTATGTTTTTCGGTACAAGAAGAAGCTGATAAGTGTTGGCAAAGTTGAAACTACTGTGGAAACCAACTTGCGTTGCTTCACTTATGAGGAACTTCAAGAAGCCACAAGTGGCTTTGACAAAGTGCTGGGAAAGGGAGCTTTTGGTATTGTGTATGAAGGAGTTGTCAACATGGGTTCTGTTACTCGTGTGGCGGTAAAAAAGTTGAACTCTTTTCTCTTGGAAGAGGTTCAGAAGGAATTCAAAAATGAACTGAATGTCATTGGCCTCACTCACCATAAGAACTTGGTCCGTTTACTTGGATTTTGTGAGACTGAACAAGAAAGGTTGTTAGTTTATGAGTACATGAGCAATGGCACTTTAGCAAGCCTTCTTTTCAATGTGTTGGACGAGAAACCAAGTTGGAAACTAAGGCTACAAATTGCAAATGGGGTTGCTAGAGGACTTTTATATTTGCATGAAGAATGCAGCACACAGATCATCCACTGTGACATAAAGCCACAAAACATACTCCTTGATGATTACTATAATGCAAGGATTTCTGACTTTGGATTGGCCAAGCTTTTGAACATGAATCAGAGCAAAACCAACACTGCCATAAGAGGAACAAAAGGGTATGTTGCTCTTGAATGGTTCAAAAACATGCCAATCACAACTAAAGTGGATGTCTATAGTTATGGAGTGCTGCTACTTGAGATAGTTTCATGCAGAAAAAGTGTGGACTTTGAGGCAGAAGATGAACAGAAAGCAATCCTAACTGAATGGGCTTATGACTGCTACACAGAAGGTGTTATTCATGACTTGGTTGAGAATGACCAAGAGGCATTGGATGACAAGAAGACCTTGGAGAAGTTAGTAATGATTGCCCTTTGGTGTGTGCAAGAGGATCCTGGTCTTAGACCAACCATGAGAAATGTGACACAGATGCTTGAAGGTGTTGTTGAAGTGCAAGTGCCACCATGCCCCTCACAAATTAGTGTTCAATATTCCTTAGTTTAA 2457 0.4098 MAFSVLHFLYCSMILSPFVTFSVVAQTKANIVIGDSHTAGSSSSPWLVSSPSGDFAFGFLPQDATPDQFILCIWYAKIQEKTIVWFASRDYPAPKGSKVEITADDGLLLTAPNGDQLWKSEVTVRASSAVFNDTGNFVLQDGGSNSVWESFKDYRDTLLPSQTMEKGQKLSSKLRRDDFKPGKFELFFQNDGNLVLHSINLPSKYANKNYFETGTIESDTLSAGKQLMFDRSGGLYVLRENNQKHNFSEGGSGVSVSTTEFYLRATLNFDGVFTFYQHPKGSSSGSGSWTPLWSEPGNICKDNLAEAGSGVCGYNSICNLGDDRRPICNCPKWYSLVDPNDPNGSCKPDFVQSCAEDELTKGKDVYEFEVLTDTDWPLSDYVLQKPFTEELCKQSCMEDCMCSVAVFRLGDSCWKKKLPLSNGRIDPTLNGAKTFMKVRKDNTSLVVPPIIEHKNNRNTMIVVGSVLLGSSACLNLVLLAAICLSTSYVFRYKKKLISVGKVETTVETNLRCFTYEELQEATSGFDKVLGKGAFGIVYEGVVNMGSVTRVAVKKLNSFLLEEVQKEFKNELNVIGLTHHKNLVRLLGFCETEQERLLVYEYMSNGTLASLLFNVLDEKPSWKLRLQIANGVARGLLYLHEECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLNMNQSKTNTAIRGTKGYVALEWFKNMPITTKVDVYSYGVLLLEIVSCRKSVDFEAEDEQKAILTEWAYDCYTEGVIHDLVENDQEALDDKKTLEKLVMIALWCVQEDPGLRPTMRNVTQMLEGVVEVQVPPCPSQISVQYSLV 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00459 818 FunFam Serine/threonine-protein kinase 155 303 - -
Pste7g00459 818 FunFam S-receptor-like serine/threonine-protein kinase 493 601 - -
Pste7g00459 818 Pfam D-mannose binding lectin 82 166 IPR001480 -
Pste7g00459 818 SMART serkin_6 523 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00459 818 CDD STKc_IRAK 529 798 - -
Pste7g00459 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 602 804 - -
Pste7g00459 818 ProSiteProfiles Bulb-type lectin domain profile. 38 152 IPR001480 -
Pste7g00459 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 203 IPR036426 -
Pste7g00459 818 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00459 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 38 808 - -
Pste7g00459 818 Gene3D - 155 303 - -
Pste7g00459 818 SUPERFAMILY Protein kinase-like (PK-like) 505 797 IPR011009 -
Pste7g00459 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pste7g00459 818 Gene3D Transferase(Phosphotransferase) domain 1 602 805 - -
Pste7g00459 818 Gene3D Phosphorylase Kinase; domain 1 497 601 - -
Pste7g00459 818 Pfam Protein tyrosine and serine/threonine kinase 525 796 IPR001245 GO:0004672|GO:0006468
Pste7g00459 818 Gene3D - 38 152 IPR036426 -
Pste7g00459 818 ProSitePatterns Protein kinases ATP-binding region signature. 529 554 IPR017441 GO:0005524
Pste7g00459 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 152 - -
Pste7g00459 818 PIRSF SRK 2 817 IPR024171 GO:0004674
Pste7g00459 818 SMART blect_4 36 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00459 Pste-Chr7 4372129 4374585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00459 509 808 Receptor kinase-like Gene Family AT1G60800 41.009 8.22e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste7g00459 PK_Tyr_Ser-Thr 6.1e-48 CL0016