Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00453 ATTTTCTCTGATCTGAGTTACATGATGGTCAAGTCATGCTGTTCTATGTGCTTGTGTTTGGTCTTACTTCACATTTTACTCTGCTTTTTGCCAACACAATCAGCACCTGAAAGTGCCATTGTGACTCAGGTTCCTGGCTTCAGTGGCTCTCTACCTTCCAAACACTATGCTGGGTATGTGACAGTGGATGAGAGTCATGGGAGGAACTTGTATTACTATTTTGTTGAATCAGAGAGTAAACCTTCTGAGGACCCTGTGGTTCTGTGGCTTAATGGGGGACCAGGATGCTCTAGCTTTGATGGATTCGTATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAAGGGGGATCTTCCGACACTGCACGTCAATCCATACAGCTGGTCAAAGGTTTCCAGTATTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCATACTCAGAGAATTTAACTGATTACTTCACTGGAGACACAAAGACTGCCACTGATTCACATACCTTTCTGCTTAAGTGGTTTGAACTATACCCCGAGTTCCGTTCCAATCCATTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTTGCTTATGAAGTAGTGAAAGGAATTGATGCTGGTGTGGAGCCCAAACTGAATTTTAAGGGTTACATGGTTGGAAATGGTGTCACAGATGATCAATTTGATGGCAATGCTCTTGTTCCATTTGTGCATGGGATGGGAATCATCTCAGATGACCTGTTTGAGGAGGTTAACCGAGAGTGTAATGGGAACTTCTATAATCCAACAAGTGATAACTGTTCTAGCAAGCTTTCAAAAGTTGATGAGTTGGTTGATGAGTTAAACATATATAACATTCTAGAACCATGCTATCATGGCACAGAAGCAGAGAAGATTACAGAATCCTATATTAAGATGCCATCTAGCTTCCGGAAGTTGGGTGAGACTGAAAGACCTTTTCCTGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCACCTGTGAGAGATGGAATTGTGCCAACATGGCCTCAGTTGTTGAAAGCTTCTCCACCTTGCACGGACGATGTGGTTGCAACCACATGGTTGAACAATGAAGCAGTCAGGACAGCAATTCATGCTGCACAGAAAAGTCTGGTCAGTAGTTGGGAATTATGCACAGACAGACTTTCCTTTGATCATGATACTGGGAGCATGATCAAGTACCACAAGAACTTAACTTCAAAAGGTTATAGAGCACTTATATTCAGTGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCGTGGACGAGATCAATGGGATACAAGATTGTTGATGAATGGAGGCCTTGGTCATCCAATGGCCAAGTTGCTGGGTATACACAAGGATACGACAAAAATTTCACTTTTCTGACTGTAAAGGGATCTGGGCACACTGTTCCGGAATATAAACCCCGAGAGGCATTGGACTTTTACACACGCTTTCTGGCTGGATTGCCAATATAAGAGAAGAGGGAATGATGTTGCATCTGATTTTCTTTGTACTTTATTAATAATAATGATTTATGGGTGTATGTAGACAGATATTAAGGAATTGTACTTTATTAAGGAAATGTTTGAATCTACGGACACATATTTTCGTTCACATTATTATGTGAAAAGTAAAAA 1677 0.4162 MMVKSCCSMCLCLVLLHILLCFLPTQSAPESAIVTQVPGFSGSLPSKHYAGYVTVDESHGRNLYYYFVESESKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGDLPTLHVNPYSWSKVSSIIYLDSPAGVGFSYSENLTDYFTGDTKTATDSHTFLLKWFELYPEFRSNPFFIAGESYAGVYVPTLAYEVVKGIDAGVEPKLNFKGYMVGNGVTDDQFDGNALVPFVHGMGIISDDLFEEVNRECNGNFYNPTSDNCSSKLSKVDELVDELNIYNILEPCYHGTEAEKITESYIKMPSSFRKLGETERPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLLKASPPCTDDVVATTWLNNEAVRTAIHAAQKSLVSSWELCTDRLSFDHDTGSMIKYHKNLTSKGYRALIFSGDHDMCVPFTGSQAWTRSMGYKIVDEWRPWSSNGQVAGYTQGYDKNFTFLTVKGSGHTVPEYKPREALDFYTRFLAGLPI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00453 497 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Pste7g00453 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Pste7g00453 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Pste7g00453 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Pste7g00453 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Pste7g00453 497 FunFam Carboxypeptidase 27 311 - -
Pste7g00453 497 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Pste7g00453 497 SUPERFAMILY alpha/beta-Hydrolases 34 496 IPR029058 -
Pste7g00453 497 Gene3D alpha/beta hydrolase 26 317 IPR029058 -
Pste7g00453 497 FunFam Carboxypeptidase 352 496 - -
Pste7g00453 497 FunFam Carboxypeptidase 399 494 - -
Pste7g00453 497 Pfam Serine carboxypeptidase 38 493 IPR001563 GO:0004185|GO:0006508
Pste7g00453 497 Gene3D - 350 496 - -
Pste7g00453 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 481 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00453 Pste-Chr7 4334345 4340943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00453 358 497 Calmodulin-binding Proteins AT2G22960 45.714 8.60e-40 140