Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00447 AGACAAAGAAAGAAACAGTCACAGAAAAAAATATGAATACCAATAATAGAATGTCAAAAACACCTTCTACTAGGGCACTCAAATGGAACTCTTCTTCAGTCACAACCAGAATTGTGGAGAACTTAAATCCTCTATGCCAAGCTACTCAACAAATAACTCTCAAGGGGAAGTTTGTGACCACACACAATCAAAGCAAATCAATACCTGGAAAGTTAATCTCTGTTCAGATTTATAGTGGGACAGATGTGGATCCTGAGACAGGTAAAGGGACCCTTAGTGAGAAAGTATATTTCAGACAAGGTGAGAGCATGAAACATAGCCATGATGCAAAAACAATGGTATATAAAATTAAGATACCTGTTGACACACATTTTGGAACTCCAAGAGCTTTTGTTATTCAAAACCATCACAAGAAGAAATTCTTCCTTCTATCTGCATCTATTGAGGCTTCTGACAACCGCATCATTCACTTTGATTGCAACTCATGGATATATCCAATCAAGAAGACCAAATCTAATAGACTCTTCTTCTCAAATAGATGTTGTCTTCCATGTCATACACCAAGAGCACTAGTGGAACTAAGAAAGGAGGAGCTTGATAGATTGAGGGGTGATGGAATGGGAGAAAGAAAAGAATGGGAAAGAATCTATGACTATGACTGCTATAATGACCTTGGTGATCCTGACAAAGGTACTGAGCACCTTAGACCTGTCCTTGGTGGCTCAAGGTTGTTTCCCTATCCTCGTAGAGGAAGAACAGCTCGAAATCGTAGTACAGTAGGTCCATCAAGTGAGAGCCGTCCACAACCAATGAACTTTGACATATATGTGCCATCAGATGAGAGATTTGGCCCCAATAAACTGAAGGAGTTGAAATCAAATTGTATCCATGCTATGGTACATTTTTTATCACCAAAGGCAGAATCATTACCACAGCAAAATTCAAAAAGCTTTCAATCATTTGAAGAGTTACTTGACATGTTTTCTAGCAATAGGAACCAAGCAATAGAGGGATGGATGAGAGACAGCTTAAAGAAACTCATACCTGTTAAGCACTTAAATGAAATAACTCATGCAATCAAGGAAAGCCGCGAGCAATTACCTATCCCTCAAATAATTTCTGAAAATGACTGGGCTTGGAAAGATGATATGGAGTTTGGTCGGCAAATGCTTGCAGGAACTCACCCCACCAGAATCCAGTGCTTAATGGCATTCCCACCGCGAAACAAATTTGGAAGAAAGAGTTCAATACAAAAATCAATCATAGAACAGAAGCTAGAAGGATGGTCACTTTCACAAGCAATGGAACAGGGAAGATTATTCATGCTGGACCACCATGACTATCTCATTCCATATTTGAACAGAATAAATGCAAATGGTGTATGTGCTTATGCATCCAGGACTCTACTATTCTTAAGGAGTGATGGCATGCTTAAGCCATTAACAATTGAACTTAGCTTGCCAGGCCCATCTCCTATCCTTGAAGTCAATAGAGTTTTTCTTCCAGCCAAGCAGGGAACACAAGCAGCACTTTGGCAGCTTGCTAAAGCTCATGTTTTAGCTAATGATGCTGTTTACCATCAACTAATTAGCCATTGGTTGTACACTCATGCAGTTGTTGAACCATTTATCATTGCCACCAAAAGAAGGCTAAGTGTTATGCATCCAATCCATCGGTTGTTGAATCCTCATTTCAAAGACACCATGCACATAAATGCCTTGGCAAGACTCACCCTTATAAACTCAGGAGGAATTCTAGAGAGACTATTATTTCCTGGAGAAGTCTGTATGCAAATATCTTGTGACCTTTATAAAGAGTGGAGATTCAGTGAACAAGGACTTCCTGCTGATCTACTTCTAAGGGGCATGGCTTGTGAAGATCCTGACATGAATAACCCCTATGGGATTCAGCTTCTGCTGCTGGACTATCCCTATGCCATTGATGGACTTGAAATATGGGTAGCCATCAAAGAATGGGTGAAAGATTTCTGCTCATTCTTCTACAAAGACAATGAGGCTATTGAGGGTGATGTTGAACTCCAAGCCTGGTGGTCAGAGATTAGAACTCAAGGCCATGGTGACAAACACAATGACACATGGTGGTACCAAATCACAACACTCTCTAACCTTGTAGAGGCACTGACAACCCTCATTTGGATTGCTTCTGCCAGGCATGCTTCTGTGAACTATGGCCAGCATGCATACAGTGGTTACCCTCCAAACCGGCCTACACTTTGCAAGAAGTTTGTTCCTCTAGAAGGGACAGTGGAGTTTGGTGAGTTCCTAAAGGACCCAGATAAGTTTTTCCTCAAGATGCTACCTGATAAGTTTGAGATGAGTCTTGCAGTAGCATTGGTAGATGTGCTCTCAAGGCACACTTGTGATGAGGTCTACTTGGGGTGCCAGCAATCACCAGGGTGGATAGACAATGAAGTGATTCAGAATAGGTTTGCTGAGTTCAAACAAGAACTGAAGGAGATTCAAGCAAGGATCATGCAAAGGAATAGAGATCCTAAGCTTAAAAATAGACGTGGCCCTGGAAACATTGAGTACACTCTCTTGTATCCTGACACCTCTAGCTCTTCTGCCTCAACAAGTGGAATCACAGTAAAAGGGATACCTAACAGCATATCAATT 2636 0.4105 MNTNNRMSKTPSTRALKWNSSSVTTRIVENLNPLCQATQQITLKGKFVTTHNQSKSIPGKLISVQIYSGTDVDPETGKGTLSEKVYFRQGESMKHSHDAKTMVYKIKIPVDTHFGTPRAFVIQNHHKKKFFLLSASIEASDNRIIHFDCNSWIYPIKKTKSNRLFFSNRCCLPCHTPRALVELRKEELDRLRGDGMGERKEWERIYDYDCYNDLGDPDKGTEHLRPVLGGSRLFPYPRRGRTARNRSTVGPSSESRPQPMNFDIYVPSDERFGPNKLKELKSNCIHAMVHFLSPKAESLPQQNSKSFQSFEELLDMFSSNRNQAIEGWMRDSLKKLIPVKHLNEITHAIKESREQLPIPQIISENDWAWKDDMEFGRQMLAGTHPTRIQCLMAFPPRNKFGRKSSIQKSIIEQKLEGWSLSQAMEQGRLFMLDHHDYLIPYLNRINANGVCAYASRTLLFLRSDGMLKPLTIELSLPGPSPILEVNRVFLPAKQGTQAALWQLAKAHVLANDAVYHQLISHWLYTHAVVEPFIIATKRRLSVMHPIHRLLNPHFKDTMHINALARLTLINSGGILERLLFPGEVCMQISCDLYKEWRFSEQGLPADLLLRGMACEDPDMNNPYGIQLLLLDYPYAIDGLEIWVAIKEWVKDFCSFFYKDNEAIEGDVELQAWWSEIRTQGHGDKHNDTWWYQITTLSNLVEALTTLIWIASARHASVNYGQHAYSGYPPNRPTLCKKFVPLEGTVEFGEFLKDPDKFFLKMLPDKFEMSLAVALVDVLSRHTCDEVYLGCQQSPGWIDNEVIQNRFAEFKQELKEIQARIMQRNRDPKLKNRRGPGNIEYTLLYPDTSSSSASTSGITVKGIPNSISI 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00447 868 ProSitePatterns Lipoxygenases iron-binding region signature 2. 543 553 IPR020834 GO:0016702|GO:0046872
Pste7g00447 868 MobiDBLite consensus disorder prediction 239 261 - -
Pste7g00447 868 Gene3D - 276 366 IPR027433 -
Pste7g00447 868 Gene3D - 494 867 - -
Pste7g00447 868 PANTHER LIPOXYGENASE 50 868 IPR000907 GO:0016702|GO:0034440|GO:0046872
Pste7g00447 868 Pfam PLAT/LH2 domain 65 166 IPR001024 GO:0005515
Pste7g00447 868 MobiDBLite consensus disorder prediction 245 259 - -
Pste7g00447 868 Coils Coil 799 826 - -
Pste7g00447 868 Pfam Lipoxygenase 180 845 IPR013819 GO:0016702|GO:0046872
Pste7g00447 868 Gene3D - 367 493 - -
Pste7g00447 868 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 50 169 IPR036392 GO:0005515
Pste7g00447 868 Gene3D PLAT/LH2 domain 14 170 - -
Pste7g00447 868 PRINTS Plant lipoxygenase signature 235 254 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 775 789 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 163 184 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 202 218 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 453 477 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 304 325 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 354 370 IPR001246 GO:0016491
Pste7g00447 868 PRINTS Plant lipoxygenase signature 137 155 IPR001246 GO:0016491
Pste7g00447 868 Gene3D - 172 274 - -
Pste7g00447 868 PRINTS Lipoxygenase signature 516 533 IPR013819 GO:0016702|GO:0046872
Pste7g00447 868 PRINTS Lipoxygenase signature 536 556 IPR013819 GO:0016702|GO:0046872
Pste7g00447 868 PRINTS Lipoxygenase signature 498 515 IPR013819 GO:0016702|GO:0046872
Pste7g00447 868 SUPERFAMILY Lipoxigenase 172 868 IPR036226 -
Pste7g00447 868 SMART LH2_4 41 168 IPR001024 GO:0005515
Pste7g00447 868 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 170 868 IPR013819 GO:0016702|GO:0046872
Pste7g00447 868 ProSiteProfiles PLAT domain profile. 60 167 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00447 Pste-Chr7 4300815 4309761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00447 59 868 Acyl Lipid Metabolism Gene Families AT3G22400 46.070 0.0 771