Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00430 TGCAAAAGAATGAGTGAAATGGAAAGGAGAGAAAGAGAGAGAGTGGAAGAAGTTCCATTATTTTGTGATGAAATCAAGAGGGCTCAAAAAGCAGCCATGGCTAATAGATGGGAAGAGTTCAAGAAAATAATGAAGGAAGACAAAGAAAACTTATTACTCAAACGTTTTGATCTCTTTAAGAACAGTGCCATCCACATAGCAACTCGTTCCAATAAGCCACAACTCCTAAGAGAATTGATAGAAATGGTACCCAAAGAAGAGAGGTGGGAAGCTATGTGCAAGGGAAATATTGAAGGGAACACTATTTTGCACGAGGTTGCGTTTTGCAAAAAGGTGAAAATGGCTAATGTTGTGTTTGAAATTGAAGATGAGTTGCAAGAAGAATCATTAGAGATAAAAGGGTCATTGCTAGAGATCACAAACATTCGAGGTGAAACCCCTTTGTTCATCGCTGCAATGCATGGGAGTCTTAAGATGCTCAAGCTTATGGCTAATCGTGTAGCACAAAAAAGTGGAGATATTGGAAAACATTGGCATCGGAATGACAAATATTCTGCTCTTCATGCCAGTGTTATGGGGCAACATTTGGATGTGGCAATTTGGTTACTGAGAATGAATAAAGAACTTGCTATGGAAAAGGATGAGAAGGAACTAACATGTCTTCAACTACTCTCCAAAATGCCACAGGTTTTTCGAAGCCACACTCACATGGGACTTTTATTTCAAAGATCAACTACAGATTTTGGAAACGCTTCGCAAAAGGTATCTGCAAATGAGTATGAAAGGACAACAGTGATTACAATGCCACGTGATCCTATCAGTGTAGCCAAAAGAAGAAGGATAAGTGCACAAAAAAGAGAAGAGAGGCGTAAGAACAAGGAAGAACCTCCTGAACGAACATCATTGCTCATAGCAACTAAAACTGGAATTGTAGAAATCGTTGAACATTTCCTTCATGTCAATCCTCAGGCTATTTATCATGGTGTACTTGACTCGTTGGTTGGTCAAATATCAGATAAAGGTCGAACTATCTTACATGAAGTTGCAAGGATGGATTACTACAAAGGGGAACACTTGGCTGGAGTAGCATTCCAACTACAAGATGAGTTGCGTTGGTATGATAAAGTGAGAAAAATTATTCCTAAACACTACAACATGCACTGTGACATAGATGGGCATACACCAGAAGATATGTTAGAAATGGAGCATGATGGAATGCTTAAAGAGGCACAAAAATGGTTAAAAGAAACAGCACAATCATGTTCCACTGTTGCTATTCTAGTTGCTACAGTTGTATTTGCTGCAGCATACACAATTCCTGGTGGAACTGAAAATGGTACTCCTGTATTCCTTCATTCTAATGTTTTTCTCTTTTTCACCATCATGGATGTTGTGGCTCTTGCTACCTCTCTAGCTTCAGTGGTGGTGTTCCTTTCAATCCTCACTTCCCCATGTGAGTTGTGGGATTTTCACAAGTCTCTCCCTCGAAAATTGAATTTAGGGTTTGCTTTGTTGTTCTTATCATTGATGACAACAATGTTAGCATTCAGTGCAACCATGTTGCTGACCATTCGTTTGGAATGGAAGAATTGGACCTCGACCTTGATCTACAGTGCTGCTTTCTTTCCTGTCACTATATTTGCAATGATTCAGTTCCCTGTTTATGTGATGACTCGAAGCATTGTTAAGCATCTCTGGAAGCAAATTAAGAAGGTCCTTCCAATGAGATTGACTAAATGTTTCATACATCTCGATTGA 1758 0.3925 CKRMSEMERRERERVEEVPLFCDEIKRAQKAAMANRWEEFKKIMKEDKENLLLKRFDLFKNSAIHIATRSNKPQLLRELIEMVPKEERWEAMCKGNIEGNTILHEVAFCKKVKMANVVFEIEDELQEESLEIKGSLLEITNIRGETPLFIAAMHGSLKMLKLMANRVAQKSGDIGKHWHRNDKYSALHASVMGQHLDVAIWLLRMNKELAMEKDEKELTCLQLLSKMPQVFRSHTHMGLLFQRSTTDFGNASQKVSANEYERTTVITMPRDPISVAKRRRISAQKREERRKNKEEPPERTSLLIATKTGIVEIVEHFLHVNPQAIYHGVLDSLVGQISDKGRTILHEVARMDYYKGEHLAGVAFQLQDELRWYDKVRKIIPKHYNMHCDIDGHTPEDMLEMEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSNVFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFLSLMTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAMIQFPVYVMTRSIVKHLWKQIKKVLPMRLTKCFIHLD 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00430 585 PANTHER CASKIN 61 563 - -
Pste7g00430 585 Pfam Ankyrin repeats (3 copies) 136 204 IPR002110 GO:0005515
Pste7g00430 585 Gene3D - 22 358 IPR036770 -
Pste7g00430 585 MobiDBLite consensus disorder prediction 277 300 - -
Pste7g00430 585 Pfam Domain of unknown function 411 521 IPR026961 -
Pste7g00430 585 SMART ANK_2a 98 127 IPR002110 GO:0005515
Pste7g00430 585 SMART ANK_2a 59 88 IPR002110 GO:0005515
Pste7g00430 585 SMART ANK_2a 182 211 IPR002110 GO:0005515
Pste7g00430 585 SMART ANK_2a 143 176 IPR002110 GO:0005515
Pste7g00430 585 SUPERFAMILY Ankyrin repeat 30 354 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00430 Pste-Chr7 4166189 4181433 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00430 123 570 Miscellaneous Gene Families AT3G12360 24.074 5.97e-12 66.6