Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00401 ATGGCTTCTTTCACTCAGCTTCTTTCTCTTCTTTTACCTTTGCTGGCAAATTCTTTTGTTAGAGTTTTTGCCTTTGAGGAGGTCTCAATCAAAACAACTAATTTGTCTCCTTTAAATTGCTCTGCTAAGATCAGAACATGTAAGGCCTCACTCTACCACATATCCCAAAATTTCACCATTGAGCAAATTGCCTCTTTTTATTCGGTTATCTCTTCCCAAATCACACCTATAATGCATGACACGAAACAAGACTACCTCATCATGGTACCTTGTTCATGCAAAAGCGTCAGTAACCTTAGTGGATATTTCTATGACACAACCTACAAAGTGAGGCCACATGACACTTTTGTGAATATTTCAAACCTGATTTTCAGTGGGCAAGCATGGCCTGATAATAGCACATTGTATCCAAATGAGAAATTAACAATACATCTTCCATGTGGGTGCTCAGAAAGTGACTCTCAAGTAGTTGTTACCTATACAGTCCAGCCAAATGATACACTAACAACGATTGCTAATCTGCTAAATTCTACACTGGCTGGCATGCTGAGCTTGAACAAGGTTCTGGCTCAGAATCATGAATTTATAGATGTTGGTTGGGTGCTATTTGTTCCCAACGATTCCAAAGGGCCACTACCTAGTGTTACTGACAAAGAAGATGTAATTTCATTTGAATCAGAAAGACCAGTGATATATAACCTTGAGGAGATTGAAGAAGCTACAAATAACTTTGATGAAACTCGAAAAATAGGAAGTGGTGGATATGGAAGTGTTTATTTTGGAATGCTAGGAAACAAGGAGGTTGCAGTGAAGAAGATGAGATCTAATAAATCTAAAGAGTTCTATGCAGAACTCAAGATCTTGTGTAAGATACACCATATCAACATCGTGGAGCTTTTGGGATATGTCAATGGAGAAGATGACCTCTATTTAGTATATGAGTATGTTCCAAATGGATCCCTTAGTGATCATCTTCATGATCCTTTACTCAAAGGGAACCGGCCTCTTTGTTGGAGTGATAGGGTTCAAATTGCACTAGATGCTGCAAAAGGTCTTGAATATATACATGATTACACAAAAGCACGATATGTGCACCGTGATATAAAGACTAGCAATATTCTACTTGATGACAAGTTCAGGGCAAAGGTGGGAGATTTTGGACTTGCAAAGCTTGTAGATCGAACTGATGATGAAAACTTTATTGCAACTAGGCTTGTAGGAACACCAGGCTACCTTCCACCAGAATCTCTGAAGGAGCTTCAAGTGACCCCAAAAACCGATGTGTTTGCATTTGGAGTAGTACTTTCAGAGCTCTTAACTGGAAAACGTGCACTATTTCGAGAGAGCCAAGAAGACATCAAAATGAAATCACTTATTACTGTTATTAATAAAATATTCAATGATGATGATCCAGAAATTGCTTTAGAAGATGTGATAGATAAGAATCTTGAAGCTAGCTATCCGATCGAAGATGCATACAAGAGTGGGAAGCATCCTTATGTGGAAACAGCCAGGTCTTCAGTGGGTTGTTTACTGGAAGATGATGAAAATTATAGTTTGTAA 1563 0.3839 MASFTQLLSLLLPLLANSFVRVFAFEEVSIKTTNLSPLNCSAKIRTCKASLYHISQNFTIEQIASFYSVISSQITPIMHDTKQDYLIMVPCSCKSVSNLSGYFYDTTYKVRPHDTFVNISNLIFSGQAWPDNSTLYPNEKLTIHLPCGCSESDSQVVVTYTVQPNDTLTTIANLLNSTLAGMLSLNKVLAQNHEFIDVGWVLFVPNDSKGPLPSVTDKEDVISFESERPVIYNLEEIEEATNNFDETRKIGSGGYGSVYFGMLGNKEVAVKKMRSNKSKEFYAELKILCKIHHINIVELLGYVNGEDDLYLVYEYVPNGSLSDHLHDPLLKGNRPLCWSDRVQIALDAAKGLEYIHDYTKARYVHRDIKTSNILLDDKFRAKVGDFGLAKLVDRTDDENFIATRLVGTPGYLPPESLKELQVTPKTDVFAFGVVLSELLTGKRALFRESQEDIKMKSLITVINKIFNDDDPEIALEDVIDKNLEASYPIEDAYKSGKHPYVETARSSVGCLLEDDENYSL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00401 520 SUPERFAMILY Protein kinase-like (PK-like) 226 462 IPR011009 -
Pste7g00401 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Pste7g00401 520 SMART LysM_2 159 205 IPR018392 -
Pste7g00401 520 ProSitePatterns Protein kinases ATP-binding region signature. 250 272 IPR017441 GO:0005524
Pste7g00401 520 FunFam Kinase family protein 220 315 - -
Pste7g00401 520 Gene3D LysM domain 148 211 IPR036779 -
Pste7g00401 520 SUPERFAMILY LysM domain 158 205 IPR036779 -
Pste7g00401 520 ProSiteProfiles LysM domain profile. 158 204 IPR018392 -
Pste7g00401 520 Pfam Protein kinase domain 245 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00401 520 SMART serkin_6 244 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00401 520 Gene3D Phosphorylase Kinase; domain 1 223 315 - -
Pste7g00401 520 Pfam LysM domain 160 205 IPR018392 -
Pste7g00401 520 Gene3D Transferase(Phosphotransferase) domain 1 316 514 - -
Pste7g00401 520 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 38 209 IPR044812 GO:0019199|GO:0045087
Pste7g00401 520 FunFam PTI1-like tyrosine-protein kinase 3 316 507 - -
Pste7g00401 520 ProSiteProfiles Protein kinase domain profile. 244 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00401 520 CDD LysM 158 204 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00401 Pste-Chr7 3852752 3859396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00401 224 494 Receptor kinase-like Gene Family AT1G51940 50.542 2.24e-89 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste7g00401 Pkinase 2e-48 CL0016