Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00397 ATGTGTGAGTTTGGTCTGAAGTATACCTTTTTTGGTCTTTCTCTTGTTATTGGTTTTGCTTACTTTTGGATGGTTGAGTTGGATGTGTTCTTGGCAGGGTTATTATGGGTGTGTTCTTGGAAGGGTTATAGTGCTATGGAGTTTATGGTTCTGCATAGCTGGATTTCCAGCTCTTATATTCTTGTTAATTTCTTGCTGCTGATTAGTTGTGGCATGACCTATGGAACTGAGACTGATGTCTTCTGCTTGAAAAGTGTAAAAAAATCCCTTGAAGACCCCAATAACTATTTGAAGTATTCTTGGGATTTCAACAACAACACTGAAGGGTACATTTGCAAGTTTTATGGGGTTGAGTGTTGGCACCCTGATGAGAATAGGGTCTTGAATCTCAAACTGTCTAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCCAGCTTAACTGGATTAGACCTTTCAATTAACAAACTTTCTGGAGCCATTCCAGGAGATATATCTAACCTTATACCATTTGCAACATCGGTTGATTTATCTTCAAATGAACTTTCTGGGGCTATTCCTGAGAGTCTTGCAAATGTTACCTTTCTTAATACCCTTAAACTCAATCAGAATCAACTCACTGGTCAGATTCCTCTACAGTTTGGTGCTATGGCACGAATTAAGGCATTTGATGTATCCAACAATTTTTTGACGGGGCAAGTTCCGATCTTTAAGAAGACTGTTGCTGTAAATTTTGCAAATAATCAAGGTCTATGTGGAGGACCTTCATTGCCTAGTTGCCAAGCCAAGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGTGCTGCTGTTGGTGGGGTGACTCTAGCAGCTTTAGGATTGGGTATAGGATTGTTCTTCTTTGTGCGACATGTTTCTTTCAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCACGAAGTCTAAAAGGAACTAAACAAATTAAGGCAAGCTATATTGATGCATTGCACAGAACATATATGGTTTCTCTGTTTGAAAAATCAGTTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGTCAGGAAGAACAGGAACTGTTTACAAAGCAGTCCTTGATGATGGCACAATCCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAACAATTCACATCTGAGATGGGTACATTAGGGTCTGTCAAACATCGCAACCTGGTTCCTCTTTTAGGTTTCTGCATGGCCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGAACAACTCCATCCTGCTGAAGGAGTGAGCACTCTTGACTGGACTACAAGGCTCAAAATTGCTATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCACGGATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGAATTTGAGCCAAAAATTTCTGATTTTGGCCTTGCCAGGCTTATGAACCCAATTGACACTCACTTGAGTACTTTTGTAAATGGAGAGTTTGGTGACTTAGGTTATGTTGCTCCTGAGTATGCAAGAACTTTGGTTGCTACACCTAAGGGGGATGTTTATAGCTTTGGAATTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCTACCAATGTGGCTAAAGCAGCTGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACAGAACTCAAAGACAATGAAAAACTCCGAGATGCTATTGATGAATCACTAGCTAGCAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTTCAGCCAACTCCAAAGGAGAGACCAACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGAGATAGATACAATTTCACTACTGAGGATGAGATCTTGGTACCTATTGATATAGGTGATAGTAACTTGGAGGAACTTATTGTAGCTCGTGAAGGCAGTCATTGA 2019 0.4027 MCEFGLKYTFFGLSLVIGFAYFWMVELDVFLAGLLWVCSWKGYSAMEFMVLHSWISSSYILVNFLLLISCGMTYGTETDVFCLKSVKKSLEDPNNYLKYSWDFNNNTEGYICKFYGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGAIPGDISNLIPFATSVDLSSNELSGAIPESLANVTFLNTLKLNQNQLTGQIPLQFGAMARIKAFDVSNNFLTGQVPIFKKTVAVNFANNQGLCGGPSLPSCQAKPSKSNMAVIAGAAVGGVTLAALGLGIGLFFFVRHVSFKKEEDPEGNKWARSLKGTKQIKASYIDALHRTYMVSLFEKSVSKMKLSDLMKATNNFSNTNIIGSGRTGTVYKAVLDDGTILMVKRLQESQYTEKQFTSEMGTLGSVKHRNLVPLLGFCMAKRERLLVYKNMPNGNLHEQLHPAEGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGIVLLELVTGERPTNVAKAAETFKGNLVEWITELKDNEKLRDAIDESLASKDVDSELFQFLKVACNCVQPTPKERPTMFEVYQLLRAIGDRYNFTTEDEILVPIDIGDSNLEELIVAREGSH 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00397 672 SUPERFAMILY Protein kinase-like (PK-like) 338 635 IPR011009 -
Pste7g00397 672 SUPERFAMILY L domain-like 77 240 - -
Pste7g00397 672 Pfam Protein kinase domain 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00397 672 Gene3D Phosphorylase Kinase; domain 1 322 434 - -
Pste7g00397 672 Gene3D Ribonuclease Inhibitor 77 266 IPR032675 -
Pste7g00397 672 Pfam Leucine rich repeat N-terminal domain 78 120 IPR013210 -
Pste7g00397 672 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 312 435 - -
Pste7g00397 672 ProSiteProfiles Protein kinase domain profile. 361 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00397 672 FunFam Nuclear pore complex protein NUP107 76 240 - -
Pste7g00397 672 CDD STKc_IRAK 367 635 - -
Pste7g00397 672 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 128 638 - -
Pste7g00397 672 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 436 655 - -
Pste7g00397 672 Gene3D Transferase(Phosphotransferase) domain 1 436 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00397 Pste-Chr7 3816609 3820183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00397 64 649 Receptor kinase-like Gene Family AT3G28450 45.882 4.77e-180 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Pste7g00397 Pkinase 5.6e-39 CL0016