Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00347 ATGGAATACGAGGAGCATGAGGAAGCTGAGTTCGCAGCGAGTTACGACGACCAGGCCCGAGTCAAAATGATCACCAGTCAGCACCAGGAGGAGGAGGAGGAAGCAGCGCCCGTCACGGCGGTGACGGCGGTGTCTCCAGCACCCACCGTGGGGTCCCGCAACAAGGGCAAGTACAAGGAGTGTCTCAAGAACCACGCCGTGGGGCTCGGCGGCCATGCCCTCGACGGCTGCGGCGAGTTCATGCCGGCAGGACCCGACGGCACTCTCGAGTCGTTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGGAAAGAGTGCCCCGACGGAGTCGGGGCCCCCTCTTTCCCTCCGCCGCGCCGCCACCAGTTCTCGCCGGCGTACTACCGAGCGCCGACGGGGTACCTTACCCAGCGTGGCGGCGCGCTGGCACTCCCGTCAACGTCAGGTGGGACCCACAGTCCGAGGGACCAGGAGGACGTGTCGGACCACCCATGTGGCGGTGGTGGGTCCCACCACAAGAAGCGCTTCCGAACCAAGTTCTCGCAGGAGCAGAAAGACAAAATGCTCGCTTTCGCTGAAAAACTGGGTTGGAGAATTCAGAAGCACGACGAGAACGTCGTTCAAGAGTTTTGCTCCCAAACCGGCGTTCAACGCCATGTCCTTAAGGTTTGGATGCACAACAACAAACACACCCTTGGTAAGAAGCCCTAG 717 0.6165 MEYEEHEEAEFAASYDDQARVKMITSQHQEEEEEAAPVTAVTAVSPAPTVGSRNKGKYKECLKNHAVGLGGHALDGCGEFMPAGPDGTLESFKCAACNCHRNFHRKECPDGVGAPSFPPPRRHQFSPAYYRAPTGYLTQRGGALALPSTSGGTHSPRDQEDVSDHPCGGGGSHHKKRFRTKFSQEQKDKMLAFAEKLGWRIQKHDENVVQEFCSQTGVQRHVLKVWMHNNKHTLGKKP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00347 238 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 57 107 IPR006456 -
Pste7g00347 238 Gene3D - 162 236 - -
Pste7g00347 238 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 107 IPR006456 -
Pste7g00347 238 SUPERFAMILY Homeodomain-like 167 236 IPR009057 -
Pste7g00347 238 MobiDBLite consensus disorder prediction 141 181 - -
Pste7g00347 238 FunFam Zinc-finger homeodomain protein 2 165 236 - -
Pste7g00347 238 MobiDBLite consensus disorder prediction 157 171 - -
Pste7g00347 238 Pfam ZF-HD protein dimerisation region 57 107 IPR006456 -
Pste7g00347 238 NCBIfam homeobox domain, ZF-HD class 175 231 IPR006455 -
Pste7g00347 238 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00347 Pste-Chr7 3278469 3279185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00347 55 234 ZF-HD Transcription Factor Family AT4G24660 55.495 3.44e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pste7g00347 ZF-HD_dimer 1.3e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01623 1 5000305 5001006 Pste7g00347 7 3278469 3279185 PCT