Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00338 GTTCACTACCCTTTCAACTTTCAAGTCTTAACCTAAGGCACATGCCAAGGTTCCTACATAAACGTTGTCCCCTTCCCCACCCTTTTCTTTCATCGTTCCCTCCATATTTCTCTCATTGCTCAAAGTGTCTCCACTGTTCTCTCTTGTAGATTTTTCATTCTTTTGTAGAAAACACTGCATAAAGTTTTCATCTTTTAATCCATCCTTTGAGAAACTATTTTTACAAGGTTTTAATTTTTGTACCATTTTTGAGGTCTAACAATGGAAGGGAGCATTGACCCTGCAACCTCAAGCCTTCTGTGTCTGGAAACCAATGACACATGCTTTGATGAGTTTGAATATAATGTTGCAGATGAGTCTCCTTTCTGGGACCGTAAAAATCTTAATTTTGGCAATCAGAGTCTGATTAAGGATAATAATGGATCGGAACATTTGTTGGATTTTCCTGTACAGAGTGATGAAACTGTGTTGGGTTTGTTTGTGAGGGAGAGCGAGCATTTGCCCCAAGATGATTACCACAAGAGGCTGCTTGGTGGAGACTTGGACTTGAGTGTTAGAAAGGAGGCTCTTGATTGGATTTGGAAGGCTCATGCATACTACGATTTTGGACCCTGTAGCTTATGCCTATCTGTGAACTACTTGGATCGGTTCCTATCAGTATATGAATTGCCAAGAGGCAAAAGTTGGAGTGTGCAACTGTTGGCTGTAGCATGTTTGTCAATTGCTGCTAAAATGGAGGAGGCTAAAGTGCCTTCTTGTTTAGATTTACAGGTTGGAGATCCTAAGTTTGTATTTGAAGCTAAAACAATTCAAAGAATGGAACTACTGGTGTTAAGCATATTGAGATGGAAAATGCTAGCTTTGACTCCATTTTCCTTCCTAGAGTACTTCCTCAGGAAGATCATATGTGATCCACTTCTAGTAAAGTCATCCTTTTTGAGATCGATAAGGCTCATCTTTGACATGATTAGATGTATCAATTTCTTGGAGTTCAGGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTCTGTGTCAAGGGAATTGCAAGTAGAAGAGATTGAGAAGGTCTTAACATGTGTCATTGTAGAGAAGGAAAGAATTTTGAAGTGTCTTGAATTGATTAGAGATTTGTCCTTGATCCAAGATTCTGCTAATTTGGGCAGCAACTTAACCCCATTTGTACCCTTAAGCCCTATGGGGGTGCTGGATGCTCCATGTTTGAGTTGTACTACAAGTGATGAATTAACAGTTGGATCATATACAGATTCTTCCCTTAATACTCCAAGTTCTAAGAGGAGGAGATTTGATTAAAGTGTGATGGGAATTTAAGTCATCAAATTTTAATTTATCTACTTCACTAAAGTTCATTTTGGTTTGGTTGAATGAGAGTTTAGTGTGGTCTTGTGGGAAGTTGGTAACACACTCAGTGAGGGTGTGTGTTGGATGAATAAGATGGAAATTTAAGGAATTTCATGCTTATAGCATGAAAAGGAGGTGTTGCAAGTAAGTTATATGATTAAGTTATAATCAAAGTTATGGAAACAGCTACTAATGCTGCAGAAATGTGGATGGGACAGGAAATTTTGATTGAAACAAAGTGTTGCTCAGCAAAGCATGTCAAGTGGCAAGAATTTAATATTTTGGGCAGAAGTTATTTTTCTTTTTGTCCTAACTTTTCAATTTTTGCGAAAGAATGAAATATAAATTGAGATTCTTTTTTTATATATTGTGCTGTTTATGAAATTATAG 1749 0.3762 MEGSIDPATSSLLCLETNDTCFDEFEYNVADESPFWDRKNLNFGNQSLIKDNNGSEHLLDFPVQSDETVLGLFVRESEHLPQDDYHKRLLGGDLDLSVRKEALDWIWKAHAYYDFGPCSLCLSVNYLDRFLSVYELPRGKSWSVQLLAVACLSIAAKMEEAKVPSCLDLQVGDPKFVFEAKTIQRMELLVLSILRWKMLALTPFSFLEYFLRKIICDPLLVKSSFLRSIRLIFDMIRCINFLEFRPSEIAAAVAISVSRELQVEEIEKVLTCVIVEKERILKCLELIRDLSLIQDSANLGSNLTPFVPLSPMGVLDAPCLSCTTSDELTVGSYTDSSLNTPSSKRRRFD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00338 349 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
Pste7g00338 349 Gene3D - 75 285 - -
Pste7g00338 349 PANTHER CYCLINS 75 288 IPR039361 -
Pste7g00338 349 CDD CYCLIN_AtCycD-like_rpt1 98 196 - -
Pste7g00338 349 SMART cyclin_7 104 192 IPR013763 -
Pste7g00338 349 FunFam D6-type cyclin 198 285 - -
Pste7g00338 349 FunFam D2/4-type cyclin 82 197 - -
Pste7g00338 349 Pfam Cyclin, N-terminal domain 75 198 IPR006671 -
Pste7g00338 349 Pfam Cyclin, C-terminal domain 202 291 IPR004367 -
Pste7g00338 349 SUPERFAMILY Cyclin-like 57 198 IPR036915 -
Pste7g00338 349 CDD CYCLIN_AtCycD-like_rpt2 202 287 - -
Pste7g00338 349 SMART Cyclin_C_2 201 318 IPR004367 -
Pste7g00338 349 Gene3D - 82 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00338 Pste-Chr7 3189086 3191725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00338 64 262 Core Cell Cycle Gene Families AT5G65420 58.706 1.24e-79 243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01603 1 4949506 4950633 Pste7g00338 7 3189086 3191725 PCT