Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00300 ATGGGAGCAAAGATGGAAGAAATGAAAGAAAAGAAGAAGAGCAAAAGGGTGGACCTAACCTTAATGTTGGGGAACCAGAAGAAGGATAGCATTGGTGGCGGTGGTGGTGGTGGTGCTGCTGCTGCATGCGACGACGACGTATTGGCGTCGCCGAGGGACGTGTTTGGGGCGCCGGTATCGGGGACGGATTCGGACAGCACGGGGAGCAGCAACTACGGCGGGCTTGGGTCACCGGGCCTGGGCCCGAAAGGGACGCCGCCGACGACGCAGCCGCAGGCGCAGCAGTGGAGGGCGATGATCGACGTGCTTAGGTTTAAGTCGGTGAGAAGATTCTCGACTATTCCTCTGCTTGCGGCGAGCTATGAGATTTCGCGGAGGAGTTTGAGGAACAAATTGGCGCGTATAAGGCCCTTGAATGAGGACGATGATTTGGATGGCGCTATGGACATTGACACTATTGCTAAGCCTTCTTGGAAGAATTTTTCTTACGCTGAACTCGCTGCTGCAACCAATGATTTCAGCCCTGAGAACTTGATTGGAAAGGGTGGTCATGCTGAAGTGTATAAAGGGTGCTTACCAGATGGTCAAGTTGTAGCAGTAAAGAGACTAATGAGGAACGAAAAGGAAGCTGAGGACACAGCTGGTGATTTTTTGTCAGAGCTTGGAATCATTGCTCACATTAACCACCCAAATGCAACACGCTTGATTGGGTTTGGAATCGACCATGGTCTCTTCTTTGTTCTTCAATTGGCCCCACATGGCAGCCTTGCCTCTTTGCTCTTTGGTTCTGAATGTTTGGAGTGGAAGAGAAGATTTAAAGTTGCTGTTGGGGTAGCAAAAGGACTGCACTATCTACACCACGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAACATATTACTCAACCTCAATGATGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCACCATGTTGTCTTCCCAATTGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGAATTGTGGATGAAAAGACTGATGTTTTTGCATTTGGGGTTTTGTTACTGGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAACAGTAGGGAAAGTCTTGTGATCTGGGCCAAACCACTGTTAGATGCAAATTTGATCAAAGAAATGGTAGACCCAAGATTAGAAGAGAAATATGATGTCACAGAAATGAAGTGTGTCATGTCAACAGCTTCCATGTGTATCCATCACATGTCCTCTAAGCGGCCATACATGAATCAGGTTGTGCAGCTACTAAAAGGAGAAGAGGTGCCTATGGAACTCAACCAAAATTCATCAACTCCAAGATCACTCTTGATAGATGCATGTGACCTGGAAGATTATACTTGCTCTAATTATTTGAATGACATCACTCGCCACAAGCAATTACTCCTGGAGTGA 1464 0.4713 MGAKMEEMKEKKKSKRVDLTLMLGNQKKDSIGGGGGGGAAAACDDDVLASPRDVFGAPVSGTDSDSTGSSNYGGLGSPGLGPKGTPPTTQPQAQQWRAMIDVLRFKSVRRFSTIPLLAASYEISRRSLRNKLARIRPLNEDDDLDGAMDIDTIAKPSWKNFSYAELAAATNDFSPENLIGKGGHAEVYKGCLPDGQVVAVKRLMRNEKEAEDTAGDFLSELGIIAHINHPNATRLIGFGIDHGLFFVLQLAPHGSLASLLFGSECLEWKRRFKVAVGVAKGLHYLHHDCPRRIIHRDIKASNILLNLNDEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDANLIKEMVDPRLEEKYDVTEMKCVMSTASMCIHHMSSKRPYMNQVVQLLKGEEVPMELNQNSSTPRSLLIDACDLEDYTCSNYLNDITRHKQLLLE 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00300 487 Gene3D Transferase(Phosphotransferase) domain 1 252 457 - -
Pste7g00300 487 ProSitePatterns Protein kinases ATP-binding region signature. 179 201 IPR017441 GO:0005524
Pste7g00300 487 Pfam Protein kinase domain 176 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00300 487 SMART serkin_6 173 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00300 487 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 148 250 - -
Pste7g00300 487 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 252 454 - -
Pste7g00300 487 Gene3D Phosphorylase Kinase; domain 1 140 247 - -
Pste7g00300 487 SUPERFAMILY Protein kinase-like (PK-like) 157 452 IPR011009 -
Pste7g00300 487 MobiDBLite consensus disorder prediction 60 74 - -
Pste7g00300 487 ProSiteProfiles Protein kinase domain profile. 173 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste7g00300 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Pste7g00300 487 MobiDBLite consensus disorder prediction 52 93 - -
Pste7g00300 487 PANTHER OS08G0249100 PROTEIN 77 453 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00300 Pste-Chr7 2800553 2806013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00300 160 486 Trihelix Transcription Factor Family AT1G70460 40.653 4.17e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pste7g00300 Pkinase 1.4e-38 CL0016