Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00295 GTGTAAACGATGCAACATTGCAACGTGAAAATGGGTCCGAAAGCTTTGTAAGAAAACGCAGGGTTTCCCCAAAAGCGATTCGGTGAAGAATCTGCGAACACGAAAATCGATTCTCCACGATGTATCAGTGGAGGAAGTTCGAGTTCTTCGAGGAGAAGTACGGCGCGAAATGCGCGATTCCCGACGCCGAAGACGACGTCGTCGAGAAGAAGATCGAGTGCTGTTCCAGCGGCAGAGGCAAGGTCGTCACCGGCTTCCACGACGGCGTCGTTTCCTTCTTCGATCGTGGCCTCAAGTTCAATTACGCTTTCCAACCTCACTCCTCTTCCGTTCTCTTCCTTCAGCAACTCAAGCAACGCAATATTCTGGTAACAATTGGGGAGGATGAGCAGCTTACTCCCCAGCAATCAGCTTTGTGCCTCAAGGTTTTTGACCTGGACAAGATGCAACCGGAGAGTTCGAGCACGACAAGTCCTGATTGTGTTGGGATATTGCGGATATTCACTAATCAGTTTCCTGAGGCAAAGATTACATCATTTTGGGTTTTGGAAGAAGTTCCACCTATATTACTCATAGCTATTGGATTGGACAATGGTTCTATTTACTGCATCAAAGGAGACATTGCACGGGAGCGTATCACCCGTTTTAAGCTTCAGGTGGAAAACAACCATTCAGCCAAAACCCTTTCTGCAGTAACTGGACTTGGGTTTAGGGTGGATGGTCAATCTCTGCAGTTATTTGCTGTGACTCCAAGTTCAGTGAGCTTGTTTTCATTGCATCAGCAACCACCACGAAGGCAAACCCTTGATCAGATTGGATGTGGCGTTAACAGTGTTGCAATGAGTGATCGCTTTGAATTGATAATCGGTCGACCAGAGGCAGTATATTTTTATGAAGTTGATGGTCGTGGTCCTTGTTGGGCTTTTGAGGGAGAGAAGAAATTGCTTGGATGGTTTCGTGGATACCTTTTGTGTGTTATTGCAGATCAAAGAACAGGAAAGCATACTTTCAACATCTATGACCTGAAGAATCGGTTAATAGCCCATAGTGCATCAGTTAAAGAAGTTTCTCATATGCTCTTTGAATGGGGTAACATCATACTCATAATGAATGACAAATCAGCTTTATGTATTGGAGAAAAGGATATGGAAAGCAAGCTGGACATGTTATTTAAGAAAAACCTATATACTGTAGCAATTAATCTTGTACAGACTCAGCAAGCAGATGCTGCAGCTACTGCTGAAGTGCTAAGGAAATATGGGGATCATCTATATAGCAAGCAAGACTATGATGAAGCAATGGCCCAGTACATACTAACTATTGGTCACCTTGAACCTTCTTATGTTATACAGAAGTTTTTGGATGCTCAAAGAATCTACAACCTCACAAATTACTTAGAGAAGCTACATGAGAAGGGACTTGCTTCTAAAGATCACACCACACTTCTATTAAACTGTTATACCAAATTAAAAGATGTTGAAAAGTTAAATTTATTTATTAAAAGTGATGACAGCATTGGGGAACTTAAATTTGATATCGAAACAGCAATCAGGGTTTGCCGTGCTGCCAATTACCATGAACATGCAATGTATGTTGCAAAGAAGGCAGGGAGGCATGAATGGTACTTGAAGATCTTGCTTGAAGATCTTGGTAACTATGAAGAAGCCTTAGAATATATTTCAAGACTTGAATCAAGTCAAGCAGGGATGACAATAAAGGAGTATGGGAAGATTCTAATAGAGCACAAGCCAATGGAGACAATTCAGATTCTCATAAGGCTTTGCACGGAAGATGGTGACAAAAGAGGACAATCAAATGGAGTGTATATGTCTATGTTGCCATCTCCTGTTGATTTTCTTAGCATTTTCATTCATCATCCCCAGTCCCTTATGGATTTTCTAGAAAAATATACCAATAAGGTCAAGGACTCGCCTGCTCAAGTTGAGATTCACAATACCCTCTTAGAGTTGTATATATCCAATGAATTGAACTTTCCTTCAATGGTGCAAGCTAATGATAGTGAAAATTACCTTAATGGAGTATCAGCAAAAACTATGGCATTAAGTGCTCAGTCTAATGGAAAAATTGCTGATCACAAAAGTTCAGAACAGGACAAGGACAAAAGGCATGAAAAGGGTTTATACTTACTTAAGAGTGCATGGCCTCCAGAGACTGAACATCCACTATATGATGTCGATTTAGCTATTATACTATGTGAAATGAATGCATTCAAAGATGGACTTCTGTATTTGTATGAAAAGATGAAACTCTATAAAGAAGTGATTGCTTGCTATATGCAGGCACATGATCATGAAGGGTTAATTGCATGCTGCAAAAGGCTGGGGGATTCAGTTAAAGGAGGGGACCCATCTCTTTGGGCAGATCTACTTAAATATTTTGGTGAGCTTGGAGAAGATTGTTCTAAAGAAGTAAAAGAAGTTCTGACTTATATTGAGAGAGATGACATTTTGCCCCCTATAATTGTTCTTCAAACTCTTTCTCGAAATCCATGCCTCTCACTTTCTGTGATCAAAGATTACATTGCTCGAAAACTTGAGCGGGAATCAAAGATGATTGAGGAGGACCGACAAGCTATTGAGAAATATCAGGAAGATACACTGGCAATGAGAAAAGAGATTCAAGATCTAAGGACAAATGCTAGAATTTTTCAGCTTAGCAAGTGCACTGCATGCACCTTCACCCTTGATCTGCCTGCTGTGCACTTCATGTGCATGCACTCATTCCACCTGCGCTGCCTTGGTGATAATGAAAAAGAATGCCCTGAGTGTGCTCCTGAATACAGGTCTGTCTTGGAAATGAAAAGAAATTTAGAGCAAAATTCTAAGGATCAGGACAGGTTTTTTCAGCAGGTGAAGGGCTCTAAAGATGGCTTTTCTGTCATTGCTGAATATTTCGGAAAAGGGATCATCAGCAAAATAAGTAATGGATCCTCTTCTGGTCCAAGAACCGGAATGGCGTCATCCACTAGTGGTTTCTAAGGCTTGAAATTTCTGCCGGTTGCTTTCAGCACTTCTGCATTTAACATTAAACAAGTTGGGCTCAGGATTGTGAATGAAATTTGGTATTTTTTGGGTTTCCGATTTCTTAATTACTGCTTGTTGTCTGGAGTCCAAGGTCCATATTTTGCATAATGTGCTGAATCGTCTTGCTCTTTTGCCAGAGTATTTAACATTTTTGGAGGATTTGAAGTTTCTGGTTCTGTGGATTTGAACAGAAAATTTCATGACAGCTTCTCTTCTCCTTCAGTCCTTGATGGAAATGCTGGACATATGTTTATAAGGCAATGTGAGATTTGTTAGGTATGAGTTCAGGTGATACTTTTCTTTTTCTTGTTTTTCTGTGTGTAAAATTATGACGGATTAGAATCATGAAAATGAGATTTTATTTTATTGTTTTAATTTTTGTGAAGTCCATTGTAACGTTACGATTAATCTATTTTAGCCAGCTGCCATTGATTATTGTGGATTTGATGTTCTATTGGTCATTTTTCTGTTGTGTTAAAAATTCCATTTGCTTTCTATTTTTTGAAGATAAATTGGTCTTTACTGTATGC 3574 0.3984 MYQWRKFEFFEEKYGAKCAIPDAEDDVVEKKIECCSSGRGKVVTGFHDGVVSFFDRGLKFNYAFQPHSSSVLFLQQLKQRNILVTIGEDEQLTPQQSALCLKVFDLDKMQPESSSTTSPDCVGILRIFTNQFPEAKITSFWVLEEVPPILLIAIGLDNGSIYCIKGDIARERITRFKLQVENNHSAKTLSAVTGLGFRVDGQSLQLFAVTPSSVSLFSLHQQPPRRQTLDQIGCGVNSVAMSDRFELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRTGKHTFNIYDLKNRLIAHSASVKEVSHMLFEWGNIILIMNDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYILTIGHLEPSYVIQKFLDAQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNLFIKSDDSIGELKFDIETAIRVCRAANYHEHAMYVAKKAGRHEWYLKILLEDLGNYEEALEYISRLESSQAGMTIKEYGKILIEHKPMETIQILIRLCTEDGDKRGQSNGVYMSMLPSPVDFLSIFIHHPQSLMDFLEKYTNKVKDSPAQVEIHNTLLELYISNELNFPSMVQANDSENYLNGVSAKTMALSAQSNGKIADHKSSEQDKDKRHEKGLYLLKSAWPPETEHPLYDVDLAIILCEMNAFKDGLLYLYEKMKLYKEVIACYMQAHDHEGLIACCKRLGDSVKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIERDDILPPIIVLQTLSRNPCLSLSVIKDYIARKLERESKMIEEDRQAIEKYQEDTLAMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSVLEMKRNLEQNSKDQDRFFQQVKGSKDGFSVIAEYFGKGIISKISNGSSSGPRTGMASSTSGF 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00295 959 FunFam Vacuolar protein sorting-associated protein 11 homolog 347 633 - -
Pste7g00295 959 Coils Coil 809 846 - -
Pste7g00295 959 CDD RING-H2_Vps11 853 893 - -
Pste7g00295 959 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 938 - -
Pste7g00295 959 Gene3D Tetratricopeptide repeat domain 348 634 IPR011990 GO:0005515
Pste7g00295 959 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 397 548 IPR000547 GO:0006886|GO:0016192
Pste7g00295 959 PIRSF Vps11 565 945 IPR016528 -
Pste7g00295 959 PIRSF Vps11 1 572 IPR016528 -
Pste7g00295 959 Pfam Vacuolar protein sorting protein 11 C terminal 895 937 IPR024763 -
Pste7g00295 959 Pfam Region in Clathrin and VPS 405 528 IPR000547 GO:0006886|GO:0016192
Pste7g00295 959 ProSiteProfiles Zinc finger RING-type profile. 855 890 IPR001841 -
Pste7g00295 959 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 564 769 IPR000547 GO:0006886|GO:0016192
Pste7g00295 959 SUPERFAMILY RING/U-box 854 895 - -
Pste7g00295 959 SUPERFAMILY WD40 repeat-like 35 251 IPR036322 GO:0005515
Pste7g00295 959 Gene3D - 30 317 IPR015943 GO:0005515