Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00286 CCATCCAACGGTGGAAATTGAGGTGGCATGTTCAGCGAGTAGAGGTTTCTTGTCTCCATTCATGTGTTGGTATACCTAGGCTCAAAGGGTGATCGTGGTTGGGCAAAAAATACAAGGTTCTTTTGATGGAGGACTCGTGGGAGAAGTGGATTGCTTCTTTGGAAACTAGTGGAGATAATTGCAATGAACAATCTCACATCAACTCACTTGATCAGGAAACGAATCTCAATGGGATAATTGCTCTAGAGTCACGAAATCTCTCATTTCAAAATGTCCACCACCATTACCAATCTTCTACCATGCCATATAACAACAACAATGTTAATAATTTTCCCACAACAATGGGAAGTAGTAGCTTATCCTATGAGGAACCAAGCATTGATGAGAGGCATTGCAAAATGGTCAAGAGTTCTAGCAATAGCTCAAACTCCATCATTTCTCAAGATGCTGCTTTTGCTAATTCTAACTCACACATACCTTATGCCTCAACCTCAACACCATCCTCATCCACCTTCATTTTGTCCTTTGAAAACTCAACTGTGGAACCTGCTGCCCTACAAAATAGGCCTAAGAGTAATAATCATTATTATTCTCCTAATAAGCACTTTGGTGGAGATGCCATATGTTCTTCCCTTTTGAGCTCAGAAGCAACAGTACTCAGCAGTGAACATGTCACAAAACCTGCAAAGGCCAAACAAGGTGCTAAGAAGTGCAGAAGCTCTTCTGAGACTCAAGATCACATAATGGCTGAGAGGAAAAGGAGACAGGAACTCTCTGAAAGGTTCATAGCACTTTCTGCCACCATTCCTGGATTGAAGAAGACAGACAAGGCCTATATACTTCGGGAAGCAATCACTTACATGAAACAACTTCAAGAGAGGGTGAAAGAGCTAGAAGAGAATCAGAACAAGAGGAAGAGAGTAGATTCAAAAATATTCATCATCAAGAAATCTAAAGTGTGTTCAAGAGAAGAAGTCATGACTTCATGTGAAACCAACTCATATACATCCACAACATCACTTCCTCAAGTTGAAGCAAGAGTGTTGGAAAAGGAAGTTCTCATAGGAATACACTGCCAGAAACAAAAGGATATTGTGCTCAAAATTATGGCCATGCTTCAAAATTTTCATCTCTCTCTCACTAGTAGTAGTGTGTTGCCATTTGGGACCTCCACTCTCAAAGTTACAATCGTTGCCCAGATGGGCGACAAATACTGTATGACAGTGAATGATGTAGTAAAAAGCCTGAGGCAAGATCTCTTGAAGTCACATGACATTCAAATGCCATATTCCTAACCTAAGAGTGTCAAATATAATGTACATTTTTTTATGGAGTGAAGTTTGCAGAAATTTTAGTTTGGCTTCTTCTCAAATATCAATGAGATATGTTTTGTAATGAAATGAACCTCAACATGG 1415 0.3972 MEDSWEKWIASLETSGDNCNEQSHINSLDQETNLNGIIALESRNLSFQNVHHHYQSSTMPYNNNNVNNFPTTMGSSSLSYEEPSIDERHCKMVKSSSNSSNSIISQDAAFANSNSHIPYASTSTPSSSTFILSFENSTVEPAALQNRPKSNNHYYSPNKHFGGDAICSSLLSSEATVLSSEHVTKPAKAKQGAKKCRSSSETQDHIMAERKRRQELSERFIALSATIPGLKKTDKAYILREAITYMKQLQERVKELEENQNKRKRVDSKIFIIKKSKVCSREEVMTSCETNSYTSTTSLPQVEARVLEKEVLIGIHCQKQKDIVLKIMAMLQNFHLSLTSSSVLPFGTSTLKVTIVAQMGDKYCMTVNDVVKSLRQDLLKSHDIQMPYS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00286 389 Coils Coil 239 266 - -
Pste7g00286 389 MobiDBLite consensus disorder prediction 186 205 - -
Pste7g00286 389 Gene3D - 198 271 IPR036638 GO:0046983
Pste7g00286 389 SMART finulus 206 255 IPR011598 GO:0046983
Pste7g00286 389 Pfam Helix-loop-helix DNA-binding domain 204 250 IPR011598 GO:0046983
Pste7g00286 389 PANTHER BHLH TRANSCRIPTION FACTOR 44 381 - -
Pste7g00286 389 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 260 IPR036638 GO:0046983
Pste7g00286 389 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00286 Pste-Chr7 2642973 2653878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00286 107 378 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.510 2.29e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00286 HLH 1.4e-09 No_clan