Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00274 GAAATGGAAATGGACCATGATATTGATCAGATTCAGAGGCATTTAGTGAATGAACAAGAGATTATTTCATCTCTTGAGGAAGAGTTGAATGGAGAGAATTCAGACCAACTAGCAGAAATATCATGGGATTGGGAAAGTTGTAGTCTTTCATGTGATTCAATATTGAATGGTGCAGCTACAAGCAATAACAACAGTGGCAATAATAACGGTTCATCATCATTGGAAGAGAACACAACACAAAATAATGCTAATTCTATAGAGAACCAAGCATTTTCTTCCTACAATCTCTCCTTTGAGGACTCCACAGCAGTGCCTAATATTCTGAACAATGCATGTCAATATTATGCAGAGCATTGTTCCAAGGAGACAGTACATGATCAAACATGCAACAACAAAAGGACCAAAAGGGATAGAAGCAATTCTCAGACGCAAGATCACATCATGGCTGAGAGGAAAAGGAGAGAGAAACTCAGCACAATGTTCATAGCACTTTCTGCCATTATTCCTGGATTGAAAAAGATGGACAAGCTCTCTATCGTTAGCAATGCTATTGATTATGTGAAATATCTTCAAAATCGTGTGAAAGATTTGGAGGAACAGAACAAGAAGACAGAATCAGTAATGTGTTTCAAAAACAACATATCCAATAATGTTGAAGAGTTTTCTGGGATCTCTGATTGCATAGACAGTGCCATGACATTTCCCAACGTTGAAGCAAGAGTCTCTGCAAAAGACATACTCATTAGAGTAATATGTGACAAAGAAAAAGACATTGTACCAAAGCTAATGTCCAAGATTGCTACTTACCATCTCTCCATTGTTTGTAGCAATGTGGAACGTGAATTCAGCATGACAATAGATGACCTAGTGAAAAAGTTGAACGAGGATTTGCTGAGATTCTGTAACTGGCAACAATAATTAATGTAGAGTTTAATTTTTGTAAGTATAATTTTATTTTTTTTTACAC 967 0.363 EMEMDHDIDQIQRHLVNEQEIISSLEEELNGENSDQLAEISWDWESCSLSCDSILNGAATSNNNSGNNNGSSSLEENTTQNNANSIENQAFSSYNLSFEDSTAVPNILNNACQYYAEHCSKETVHDQTCNNKRTKRDRSNSQTQDHIMAERKRREKLSTMFIALSAIIPGLKKMDKLSIVSNAIDYVKYLQNRVKDLEEQNKKTESVMCFKNNISNNVEEFSGISDCIDSAMTFPNVEARVSAKDILIRVICDKEKDIVPKLMSKIATYHLSIVCSNVEREFSMTIDDLVKKLNEDLLRFCNWQQ 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00274 305 Coils Coil 8 35 - -
Pste7g00274 305 Gene3D - 137 212 IPR036638 GO:0046983
Pste7g00274 305 MobiDBLite consensus disorder prediction 125 147 - -
Pste7g00274 305 Pfam Helix-loop-helix DNA-binding domain 144 191 IPR011598 GO:0046983
Pste7g00274 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Pste7g00274 305 PANTHER BHLH TRANSCRIPTION FACTOR 30 296 - -
Pste7g00274 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 203 IPR036638 GO:0046983
Pste7g00274 305 Coils Coil 180 207 - -
Pste7g00274 305 SMART finulus 147 196 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00274 Pste-Chr7 2554858 2559660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00274 92 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.683 1.20e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00274 HLH 1e-09 No_clan