Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00273 GAAAAGGTTGAGTGGCATTTATTCAATGAACACAACAACATGAAGATGAACATGAACTCTCTTGAGGAAGAGTTGAAGGGAGAGAATCCAGTGAAGCCAGAACTGTGTTTGGAAACTCTTCCTTGTGCTTCACCAAACATTGCCAATTCTTCAACTTTGGAAGAGAAGACACAACAACATCTTTCCTCAAACAAACCAAATTTGTCGTCCAATGTTACCACTTTTGAGGACTCAATCAACAAAGTGCCAAACGATGTTCCTAAAAGAACATTTCCATGTAATGTGGAACATGAACATTTGAAGGAGAATCAAGAAGAGGAAACAAACTGTAGAAAACCAAAGAGGGGTAGAAGCAGTTCTCAGACACTAGTTCATATAATTGCTGAGAGGAAGAGGAGAGAGAATCTCACCAAATTGTTCATAGCACTCTCCGCCATTATTCCTGGATTGAAAAAGATGGACAAACTCTCAATCCTTAACCATGCAGTCGATTATGTGAAATATCTTCAGAATCATGTTAAACTTTTGGAGGAAAGAAACAAGAAGACAAGTATGGAATCTGTATGCTACTTCAAAAACAAAAAACCCAATATAGACAAAATTTCAAGGATCTTTAGTAGGTTACATGGTACCAAGACATTTCCCAACGTTGAAGCAAGAGTTTCAGCAAAAGATGTACTCATTAGAGTTATCTGTGACAAACAAAATAACATTGTTACAAAGTTACTGTCCAAGCTTGCAACCTATAATCTCTCTATAGTTTGTTGCAATGTTTTGCCATTTGGAAATTCTACTCTAGACATTTCCATCATCGCTAAG 819 0.37 EKVEWHLFNEHNNMKMNMNSLEEELKGENPVKPELCLETLPCASPNIANSSTLEEKTQQHLSSNKPNLSSNVTTFEDSINKVPNDVPKRTFPCNVEHEHLKENQEEETNCRKPKRGRSSSQTLVHIIAERKRRENLTKLFIALSAIIPGLKKMDKLSILNHAVDYVKYLQNHVKLLEERNKKTSMESVCYFKNKKPNIDKISRIFSRLHGTKTFPNVEARVSAKDVLIRVICDKQNNIVTKLLSKLATYNLSIVCCNVLPFGNSTLDISIIAK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00273 273 MobiDBLite consensus disorder prediction 51 71 - -
Pste7g00273 273 Gene3D - 119 189 IPR036638 GO:0046983
Pste7g00273 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 186 IPR036638 GO:0046983
Pste7g00273 273 PANTHER BHLH TRANSCRIPTION FACTOR 26 273 - -
Pste7g00273 273 SMART finulus 126 175 IPR011598 GO:0046983
Pste7g00273 273 Pfam Helix-loop-helix DNA-binding domain 124 170 IPR011598 GO:0046983
Pste7g00273 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00273 Pste-Chr7 2507991 2515852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00273 69 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 43.318 6.81e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00273 HLH 1.1e-10 No_clan