Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00265 TGGCTTTCTATTTTGGTAATATGATATCGAAATCAATCATATTATGATATTACAATTATATGCATAACTTTGCTGCTGAAATTATTCGTTTTTGTGCAGGACACCAATGATGATTATAATTTATTCAGTGAACATGACAACAAGTATTTTGAAGAATTGGAGGGAGAGAATAATTCAGTGGATCCTGCAGAAATCTCATGGGAAAACCTGCACTCTTATTCTTGTGTCACTAAGGAAACCCCCACCCTTCAAAGCAGTTCTTCATCATTGGAAGAGAACACTGAGTTTGATATCTCAAGTGTCATACAACAACAACATGCTGCTTCTGCTGAGAGACCAAAGTCTTGCATTCTCTCTTTTGAGGATTCCACTTCACTGCCATGCCTACATCTTGCTGAACATTCAAAGCATCAGATTCATCAAGAAAAGCCAAAGATTAGAAAACCCCTCAAGAGGGGTAGAAACTCTTCTCAGACACTTGATCACATATTGGCTGAGAGAAAAAGGAGAGAGACAATTACCAGAATGTTCATATCTCTTTCAGCACTTATCCCAGGCTTGAGAAAGATCGACAAGGCTTCTGTTCTTAACAACGCTGTAGAGTATGTGAAACATCTTCAGCAGCGTGTGAAAGATTTGGAGCAAGAGGACAACAAGAAAAGAGAGATAGAATCCAAAGGATGCTTTAAAATAAACAAGACCAATGATGTTGCTGATGAAGTTCCTTCATGCACCTTTGATAATAACCCTATCAAGATGTGTCCCAAAGTTGAAGCAAGGGTTTTAGGAAATGATGTACTCATCAGAGTAACATGTGAGAAACAAAAGAACATTGTACGAAAGTTACTGATCAAGATTGAAGCTCACAATCTCTGCATAGTGTGCAACAATGTTTTGGCTTTTGGGAATTCCTCTCTCAATTTTACCTGCATTGCTAAGAAAATGTTTCCTTCAAAGGGAGAAACTCGCTTTTGGGATTCTAAATGA 987 0.3789 MFISLSALIPGLRKIDKASVLNNAVEYVKHLQQRVKDLEQEDNKKREIESKGCFKINKTNDVADEVPSCTFDNNPIKMCPKVEARVLGNDVLIRVTCEKQKNIVRKLLIKIEAHNLCIVCNNVLAFGNSSLNFTCIAKKMFPSKGETRFWDSK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00265 153 Coils Coil 21 51 - -
Pste7g00265 153 Gene3D - 1 53 IPR036638 GO:0046983
Pste7g00265 153 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 31 IPR011598 GO:0046983
Pste7g00265 153 PANTHER BHLH TRANSCRIPTION FACTOR 2 138 - -
Pste7g00265 153 Pfam Helix-loop-helix DNA-binding domain 4 32 IPR011598 GO:0046983
Pste7g00265 153 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 43 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00265 Pste-Chr7 2418816 2421089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00265 2 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.143 1.79e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste7g00265 HLH 0.00024 No_clan