Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00253 ATGGAGACACAGAATCAATCAGAGCCTACAGGATTTAAAGGGATGCTTCCTCCACCACCTGGAAGTTTCCAAGACCGTGAAGACCTTATTAAACATGTTCGTGATTTTGGTGCTAATCAAGGATATGTTGTGACCATCAAGAAGTCCAGAAAGGATAGAAGAGTCATCCTTGGCTGTGACAGAGGAGGTGTCTATCGTAATAGACGCAAAATTGATGAAAGTAAGCGCAAAAGGAAAGCAACTTCACGCCTTATAAATTGTCCTTTTGAAGCCATAGGTAAAAAGGAAGATGATACATGGGTACTTACTATAAAAAATGGAGATCACAATCATGAACCATTGAAAGACATATCAGAACATCCTTATAGTCGACGTTTCACTGAGGAAGAAGTGAGACAAATTAAACAAATGACTGAAGCTGGTATAAAACCTCGTCAAGTGCTTAAAGCTCTCAAGCAAAGTAATCCAGAATTGCACTCAACACCAAGGCATTTGTACAACCTCAAAGCAAAGATTCGTCAGGGAAATCTATCAGAGAAAACTTTTAAGTCATGGAGACCAAATAGATCTATCCCTATCGAGACAAACAATTCATCTGATGGTTCATTAAGCCAAAACTACCAGCTGCCGAAGGTCCCAAATTTTATTGGGGGGGAATTTGTAGATTCTCTGGGTTCTGTAGTCATTGATGTTATAAATCCTGCAACACAAGAAGTTGTATCTCAAGTTCATTTAACTACATATGAAGAGTTTAAAGCTGCAGTTAGTGCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACTCCTATCACCATTCGTCAACGTATTATGTTTAAACTTCAAGAGCTTATCCGCAGAGATATTGATAAGCTTGCCATGAACATCACCATAGAACAGGGCAAGACATTAAAAGGTGCTCAAAGAGATGTGCTTTATGGTTTAGAAATGGTGGAGCATGCTTGTGGGATGGCAAACCTGCAAATGGGGGAATTTGTCCCCAATGCCTTCAATGGAATTGATACATACTGCATTAGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCACCTTTAACTTTCCAGCAACAATACCCTTGTGGGAGGTTGAAAGCCCATCAAGGATAATTAATTGTAATTGGGGGCAAGATAACTTCTCACACACTCTCAGAGCTCTAACATAG 1179 0.4003 METQNQSEPTGFKGMLPPPPGSFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDESKRKRKATSRLINCPFEAIGKKEDDTWVLTIKNGDHNHEPLKDISEHPYSRRFTEEEVRQIKQMTEAGIKPRQVLKALKQSNPELHSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSIPIETNNSSDGSLSQNYQLPKVPNFIGGEFVDSLGSVVIDVINPATQEVVSQVHLTTYEEFKAAVSAAKQAFPSWKNTPITIRQRIMFKLQELIRRDIDKLAMNITIEQGKTLKGAQRDVLYGLEMVEHACGMANLQMGEFVPNAFNGIDTYCIREPLGVCAGICTFNFPATIPLWEVESPSRIINCNWGQDNFSHTLRALT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00253 392 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 52 368 IPR010061 GO:0004491
Pste7g00253 392 Pfam Aldehyde dehydrogenase family 227 368 IPR015590 GO:0016491
Pste7g00253 392 MobiDBLite consensus disorder prediction 1 25 - -
Pste7g00253 392 SUPERFAMILY ALDH-like 206 367 IPR016161 GO:0016491
Pste7g00253 392 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 208 370 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00253 Pste-Chr7 2325751 2328160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00253 210 366 Aldehyde Dehydrogenase Gene Family AT2G14170 75.796 2.57e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste7g00253 Aldedh 1.2e-35 CL0099