Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00241 AAAATTTTGTTCTCGCTTTAAGTTCTCTCTCCCTCTTGCGTAGGGTTTTGTTTCGATTCTCGCTCTCTAGGGTTTTCTCATCCCTTTTCGATCCCCAATTCCCTTCTTTCATCTTTCAACACTCAGCGCTTCTCTTTCCCTTCCAATTTCGATTTCCTCGTTAGTTTTTCGTCGAATCCCTCAATCCCGCAAAGCCAAAGGTTCAATTCAGCGTCACCTTCAATCTAGGGTTTCGTTTCGAGAATGCCTCCAAAAACGCCGAAGCGAGGGTCCGCGTCGAGCGGTTCCAAGAGGGGTGGCAGAGGCGGCAGGGGAGCGCCGAAGAGTGCACCGAACCAGCAGCACCATGAAGCTGCGGATGAGGCGGTGAAGGTTGAGGAGAAACAGCCCGTGGTTATTGTTGATGATGAACAACAGAAGGTGGTGGAAGAAGAGAACCCTGTGGTTGAAGAGAAACAGCTTCTTGTTGAAGAGAAAGAATCTGTTGTCGTTGTTGAGGATAAGGCCATTGATATGAACCAAATGGCTCCGGAGGCTGTGGAAGAAGCGTCCCGTGTGGCTAATCGGTTGACTGTGCCGAAAATGAGGTCACTTGTGGTTTCAGGGAATAGGGGCAAGTGCAGCCGATACGGTTGCATTTTTTCCCCAATGCTTGATATTGGTACTATTGGGACAAATGCAGCCACCAAAAAGTTGGGATTTGGGACAAATCTGGCTGCTTGCGGTTGCAGTTTTGTCTTAATCCTTGATATTACAAATCCGCAATGTGATAGCACATACCTAAAAACCCTTGTTGAGATCCGTCCTATCCTTCTTGTGTTAGCTGTGTATTTGAGGCTTGTGATTATTTTTTTGTTAGAAGGAACTGGAAACGATGAAGAGGAGGTTAAGGAGTCGATAGATGAATATGAGAAAGATGAACGCTTAGACTTGGAGGATAATGATCCTGAGTATGAAGCTGAGGAGTATGGTGGAGTTGATTATGATGAGAAGGAAATTGAACAAGATGAGGGTCATGAGGTGGGAAATGAAGTAGAGGAAGAAGAGGCTGAAGATAATGCAGGTGAAGAAGAGGGTGATATGGGCGAAGAAGAAGTTGAAGATGTTCATGATGAACTTGAGGGTGAAGAGGAGCATGAGCATGCTGGTGAGGAGCATGACCATCCTGACTTTGCTGATGTGGAGGAAGAGGAACACCGAGAAGTTGTGAAGGAGAGGCGAAAGCGGAAAGAATTTGAAGTTTTTGTTGGGGGCTTGGACAAGGATGCTACTGAGAGTGATCTGAGGAAAGTTTTTGGTGAAGTTGGGGTGGTTACAGAGGTCAGGTTGATGATGAACCCTCAAACTAAAAAGAACAAGGGATTTGCATTCTTGCGTTTTGAAACTGTGGAACAAGCAAAACGAGCTGTAGCAGAGCTAAGAAATCCAGTGATTAATGGCAAACAATGTGGTGTCACTCCTAGTCAGGACAGTGATACCCTCTATTTGGGAAACATATGCAAGACATGGACGAAGGAAGCCTTAAAAGAGAAGTTGAAACATTATGGAGTTACGAATGTTGAGGATTTGACTTTGGTAGAAGATACCAATGATGAAGGAAAGAACCGTGGATTTGCCTTTTTGGAATTTTCCTCTCGTTCCGAAGCTATGGATGCCTTTAAACGACTGCAGAGGAGGGATGTTGTATTTGGAGTTGATAAGCCTGCAAAAGTTTCTTTTGCAGATTCCTTTATTGATCCGGGTGATGAAATTATGGCACAGGTTAAAACTGTGTTTATTGATGCATTGCCTCCTTCATGGGATGAAGATTATGTCCGGGATCTTCTGAAGAAATATGGAGAGATTGAAAAGGTTGAGCTTGCCAGGAACATGCCAGCTGCGCGTAGGAAAGACTATGGGTTTGTTACATTTGGCACACATGACGCCGCTGTAAAATGTGCTGACAGTATTACGGGCACAGAGTTTGGTGAGGGAGACAGGAAGGCAAAAGTTAGGGCTAGGTTGTCTAGACCACTCCAGAGAGGTCGTGGAAAACACATTAGTCGTGGTGACTATCGTTCTAGTCGAGGATCTGGAATGATGACGAGGCATTCTTGGAGCCGACCTGCACCTCGTACTTTTTCTCCTCGCGGTGTAAGAGGAGTTGGAAGTCGTGCTCCACCTGTCAGACCAGTTAGTGTGAGAGATAGACGCACTATCATGTCCATACCAGCAAGAAGTAGGCCAGTGCCTCCTCCATCTAGATCTTATGAACGGAGACCAGTTGCTCCTGTATATCCTAAAAGTAGCATGAAGAGAGATTACGGTCGACGTGAGGATATACCACCTCCAAGAAGTAGAGTTACTGTAGATTATGGCTCAAGGGTGGCTTCTGAACGACGGCCATCTTACAGGGATTATCCTGCCCGTGGTCCTGGCTACACCGAGCTCCCTAGAAGCACATCTCGTGGTGCACCAAGGAGAGGCTATGTGGATGATGGATATGGCCACAGATTTGAGAGGCCTCCTCCTCCACCTCCTCCTTCCCATCTAAGTTATCGTGAAGGACGTCCCCCCCGTGATTACGATGGTCTTTCTGGCTCAAAGCGTTCTTATGCTGCAATGGATGATGTACCTCCACGTTATGCTGATACTGGTGCCCGCCAATCAAGAGCTCGATTAGACTATGACTATGGTGGTAGTGGTTCACAATATGGAGATGCTTATGGTGATAGACTTGGAAGATCTAGTATAGGGTATGGTGGTGGCAGCAGAAGTTCAATTTCTAGTCAAGATTCACATGGGATGTATAGCAGTCGACAAGGCATGAGTTATGGAGGAGGTTCTTTTGGTGGTGGTGGTGATGTTGGTGGCATGTACTCATCAAGTTATGGTGGTGATTACATTTCTCGTGGAAGTGATGTTGGTGGCAGCTCATATTCGTCGGTGTATTCTGGCAGGGGCGTGGGTGGTGGTAGCAGTTACATGGGTGGTGGGGGATCGGGATCTTATTATTAAGGTAAGTCATCTGATAACTTATTGGGATTGCATTTTGTGGTACATCAGGACGTGTCCAGTATTAGTGAATAATATTTTTGAGAGATTTTCCAATCCTCGAAATAGCATCTTATATTTTTTCACAAGGGCTGGCAAAGGTTGCACTCTGGTCACCAGTGAATTTGTCTATGAACAGATCTGATATAATAAAGTGGCTGCTGTAGGATGACCGTTGAAGCTTATGCACATTACAATGCCTACAATTTGGAGACAAAGAACCAGTTTTATTTATAGCCTTTCTTTGGAATTTGTCACAAAAACTAGCTCATGTTAATTCAAGCTATCTTGGGTCTTCTCTGGATGAGGATGTATTATCAGTATGAATTTGTGCTGTATGGACTCAAGTTAATTATAGAGATGGAAAAAGTATTGAGCAGTGATGTGTAATTAAACCCTGATTTATGATATCTTACTTGGACGGATAATGTGAAAGATTTCCCCACTGCTCTATCTTCCTTTTCCTTTGGACAGAGACCAGGCTAGAGATGCTACTTGTTTGATTAAGGCTTCATGGATTTTTACCTGCTGAATTTATCAATAAGTTGGTTCTTTATTTTGAATCTCTAAAGAGATCTTTAGTTACTTTGGATGGATTACTTGTTTTTGCAGTGATATGATCAGAGCGGAAGTGAACTAATTAGCCTTTTGTTGAGCTAGTAGTAATAAGAGCACTACTGCAGCAATTAATAAAGTCAAATGATTGGTTTCTTGGGATTTATTTGACTTGGTGTTATCTCCTAAGATAGTAAAAACCACAACGCATTGGTAATATTTGTTGCTGGAATGATATGATTTGATACTTTTGAGGTATGTGTGTTGAGGGGGACTAACTACAAGACAATGCTAAAGATGCATTGATATTTGTCCTTAGGTAGCTAACTTAATAGATTTCCATATTTGCTATTCAATCATTTTTACGTAAATGGTTGACTTCCACTGACATGTGAATTGCCTTTGCAATATCTTGGGAAAATGCTACAATCAAGTGATTAATAAAGTAGCAGAAAATGGTTGAGTATCATCTGTTATTGAAAGTTTCTGAATTGGAATTAATTATTAAAGTTGGCTCTTTATGCACCTGGTTATGCAACCTTCCTGCTTAATATAACCAAACGCTATTCCAAAGGCAAAGGTTGCCAAAGTTTATGCACGTGTGGATTTGGTCTTGATTTTATGTTTAAGTGAGTGTCTCCATTTCCCCTACCATGTTGGTAATTTCAATTGTTTTGTTTAGTAAGGTACTGGAAGCTATTGCCTAAACAATGGGGTATTGACCAAATATGACTTCTTGGTGGGTTCGTTTAAGACTACAAAGCTTGTTAGGGTTTGAGTTGTGCTAAATTAGATTGTTTCACGTATAATTTTCTCATGCATTTAGCACGGATTTGGAATTATTGTAGAATATGAAATATTCTCAGGTTTGTTGGGCTTTTGAAATTGTTAAGTTCACAAGTGGGAGTGTTACTTTCTATGCACCATAAAACTCGTGTGCCACTCCTCTCTATTCTGGAAAATCTAATCTAGAATGTAATTTTACATTTCGGATTGTACTTTATGGAATGGACATGGGGTGTCATAAGATTTTCATGGCATGGGGGAAGAACTGCTCACAAGTAGTTAGGTGGGAACTGAAGTTTCATTTCGTGGGCATCTTTCATTTGAATTATATTAGTGAGGGTTATATACTAACTTAAGTTCTAGTTTCCAGTTTGTTCTCTTTCTCTCGGTGCAGGGTCTAAGCTCTCTTCAAGCACGTTTGGTAACTCTCTGTATGCATATGGAAGTTTGCTTTTCTCTGTCATTTTATTTAGTTGGACGCTGTCACAGTTATTTGTAAATCAATGTTTTGTCGATTGCTCATGCATGGCATTGTAAACACTAGGTAAAATGGCGTGTTGCGCAGATTCATATTTATCCCGAATATCTTGTGCATATGCTAATAACGACTAGTACAACTAAAGAAAGCAGGGTTTTGGCATGGTGATATAGGTGTCAAAGTAAAATGTGGAAATTTTGGTTGCCCC 5060 0.4213 MPPKTPKRGSASSGSKRGGRGGRGAPKSAPNQQHHEAADEAVKVEEKQPVVIVDDEQQKVVEEENPVVEEKQLLVEEKESVVVVEDKAIDMNQMAPEAVEEASRVANRLTVPKMRSLVVSGNRGKCSRYGCIFSPMLDIGTIGTNAATKKLGFGTNLAACGCSFVLILDITNPQCDSTYLKTLVEIRPILLVLAVYLRLVIIFLLEGTGNDEEEVKESIDEYEKDERLDLEDNDPEYEAEEYGGVDYDEKEIEQDEGHEVGNEVEEEEAEDNAGEEEGDMGEEEVEDVHDELEGEEEHEHAGEEHDHPDFADVEEEEHREVVKERRKRKEFEVFVGGLDKDATESDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFETVEQAKRAVAELRNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDLTLVEDTNDEGKNRGFAFLEFSSRSEAMDAFKRLQRRDVVFGVDKPAKVSFADSFIDPGDEIMAQVKTVFIDALPPSWDEDYVRDLLKKYGEIEKVELARNMPAARRKDYGFVTFGTHDAAVKCADSITGTEFGEGDRKAKVRARLSRPLQRGRGKHISRGDYRSSRGSGMMTRHSWSRPAPRTFSPRGVRGVGSRAPPVRPVSVRDRRTIMSIPARSRPVPPPSRSYERRPVAPVYPKSSMKRDYGRREDIPPPRSRVTVDYGSRVASERRPSYRDYPARGPGYTELPRSTSRGAPRRGYVDDGYGHRFERPPPPPPPSHLSYREGRPPRDYDGLSGSKRSYAAMDDVPPRYADTGARQSRARLDYDYGGSGSQYGDAYGDRLGRSSIGYGGGSRSSISSQDSHGMYSSRQGMSYGGGSFGGGGDVGGMYSSSYGGDYISRGSDVGGSSYSSVYSGRGVGGGSSYMGGGGSGSYY 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00241 917 MobiDBLite consensus disorder prediction 1 49 - -
Pste7g00241 917 Gene3D - 248 411 IPR012677 -
Pste7g00241 917 MobiDBLite consensus disorder prediction 213 293 - -
Pste7g00241 917 FunFam Heterogeneous nuclear ribonucleoprotein Q isoform A 265 411 - -
Pste7g00241 917 CDD RRM_SF 510 584 - -
Pste7g00241 917 SUPERFAMILY RNA-binding domain, RBD 503 611 IPR035979 GO:0003676
Pste7g00241 917 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 331 409 IPR000504 GO:0003723
Pste7g00241 917 MobiDBLite consensus disorder prediction 590 644 - -
Pste7g00241 917 Coils Coil 205 225 - -
Pste7g00241 917 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 333 401 IPR000504 GO:0003723
Pste7g00241 917 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 413 478 IPR000504 GO:0003723
Pste7g00241 917 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 510 575 IPR000504 GO:0003723
Pste7g00241 917 SMART rrm1_1 509 584 IPR000504 GO:0003723
Pste7g00241 917 SMART rrm1_1 412 491 IPR000504 GO:0003723
Pste7g00241 917 SMART rrm1_1 332 405 IPR000504 GO:0003723
Pste7g00241 917 MobiDBLite consensus disorder prediction 33 49 - -
Pste7g00241 917 Gene3D - 412 494 IPR012677 -
Pste7g00241 917 FunFam RNA recognition water-stress protein1 498 619 - -
Pste7g00241 917 SUPERFAMILY RNA-binding domain, RBD 332 477 IPR035979 GO:0003676
Pste7g00241 917 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 508 588 IPR000504 GO:0003723
Pste7g00241 917 Gene3D - 498 617 IPR012677 -
Pste7g00241 917 MobiDBLite consensus disorder prediction 212 321 - -
Pste7g00241 917 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 26 914 - -
Pste7g00241 917 MobiDBLite consensus disorder prediction 832 852 - -
Pste7g00241 917 MobiDBLite consensus disorder prediction 656 801 - -
Pste7g00241 917 MobiDBLite consensus disorder prediction 294 321 - -
Pste7g00241 917 MobiDBLite consensus disorder prediction 683 697 - -
Pste7g00241 917 FunFam Heterogeneous nuclear ribonucleoprotein Q 412 494 - -
Pste7g00241 917 CDD RRM_SF 333 404 - -
Pste7g00241 917 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 411 495 IPR000504 GO:0003723
Pste7g00241 917 CDD RRM_SF 413 480 - -
Pste7g00241 917 MobiDBLite consensus disorder prediction 888 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00241 Pste-Chr7 2254306 2261202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00241 333 604 Eukaryotic Initiation Factors Gene Family AT4G34110 22.373 9.40e-16 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g00241 7 2254306 2261202 Pste7g00241 7 2254306 2261202 ECH